Note: ('-' = gap, '.' = blank space.) ....5...10...15.._..20_.__...____25.____..30...35...40__...45___....50...55...60...65...._70...75.._.80_________...85.___._______.90...95..100_..105..110..115..120..125..130.__.135__....140._..145..150.._155.._160..165..170..175..180.__.185..190..195.____.200..___.205..210...__215..220..225..230..._235_..240..245..250..___.255_._.._260.______..______265___.____.____________________270.__._____.__275..____.._280...285....________290__________..295...300__.._305.__.__310..._315..320..325..330.._.335______..___.__.340__._______.__._345.._350...____355.____.____._____360____._____.365..370..375_..380. Rv0260c.seq ... Evalue MAQAHSAPLTGYRIAVT-SA-R-R--AEE-----LC----ALLRRQGAEVCSAP--AIKMI---ALPD-DDELQNNTEALIADPPDILV--AHTGIGFR-GWL---------AAAEGW---G-------LANELLESLSSAR-IISRGPKATGALRAAGLREEWSPDSESSHEV--LEYL--LESG--VS-RT-RIAVQLHGA-ADSWD-PFPEFLGGLRFAGAQVVPIRVYRW--KPAPLGGVFDHLVTG----IARRQF---DA-VTFTSAPAA---AAVLERSRELDIEDQLLAAL-R-T-DVHAMCVGPVTSRPLIR---KG-V-P-TS-A-PE------RM-------RL---G----A--------------------LARH--I-----A---EELP----LL---GSCT-FKAAGH----------V----------IEIRGTSVL-V--DD-SVKP--L--SPSGMA--ILRALVHRPGGVVSRGDLL-R-VL------PG---D--G--S--D-------T--H--AVDT-AVLRLR-----TAL----G----D-----K-N----I-----VATVVKRGYRLAVD-SRHDDV gi|15839642|ref|NP_334679.1| transcriptional regulator, putative... 0.0 MAQAHSAPLTGYRIAVT-SA-R-R--AEE-----LC----ALLRRQGAEVCSAP--AIKMI---ALPD-DDELQNNTEALIADPPDILV--AHTGIGFR-GWL---------AAAEGW---G-------LANELLESLSSAR-IISRGPKATGALRAAGLREEWSPDSESSHEV--LEYL--LESG--VS-RT-RIAVQLHGA-ADSWD-PFPEFLGGLRFAGAQVVPIRVYRW--KPAPLGGVFDHLVTG----IARRQF---DA-VTFTSAPAA---AAVLERSRELDIEDQLLAAL-R-T-DVHAMCVGPVTSRPLIR---KG-V-P-TS-A-PE------RM-------RL---G----A--------------------LARH--I-----A---EELP----LL---GSCT-FKAAGH----------V----------IEIRGTSVL-V--DD-SVKP--L--SPSGMA--ILRALVHRPGGVVSRGDLL-R-VL------PG---D--G--S--D-------T--H--AVDT-AVLRLR-----TAL----G----D-----K-N----I-----VATVVKRGYRLAVD-SRHDDV gi|41409804|ref|NP_962640.1| hypothetical protein MAP3706c [Myco... e-165 MAppdSAPLTGYRIAVT-SA-N-R--AEE-----LC----ALLRRNGAEVtSAa--AINII---ALPE-DQELHRHTEAVIAQPPDILV--AHTGIGFR-GWV---------AAADGW---G-------LApQLLSALSQAR-IVARGPKATGALRAAGLHEEWSPkSESSREV--LRYL--LDSG--VA-gk-RIAVQLHGA-ADGWD-PFPEFINGLRsAGAQVMPIHVYRW--KPTPaGGeFDQLVAS----VARRQF---DA-VTFTSAPAG---AALLERSRELgIEDQLLqAL-R-S-DVHAMCVGPVTAQPLIR---aG-V-P-TS-S-PE------RM-------RL---G----A--------------------LARH--I-----A---QELP----pL---rSCT-LRAAGH----------q----------IEIRGTcVL-V--Dg-AVKs--L--SgSAMA--tLRALAaRPGdVVARNDLL-R-VL------PG---N--S--N--D-------p--H--AVDT-AVLRLR-----TAL----G----D-----K-N----I-----IATVVKRGYRLAID-T..... gi|54026532|ref|YP_120774.1| hypothetical protein nfa45590 [Noca... e-113 ......APLAGFtVGIT-AA-R-R--AEE-----FA----TLLtRRGAtIvSAP--AIRII---pLaD-DtELERvTRTLVAEPPQIaV--AtTGIGFR-GWM---------eAAEGW---G-------LAEyLrgTLAGTR-LLARGPKAkGAIRAAeLREEWSPaSESSaEV--LDHL--LaEG--VE-gV-RIAVQLHGA-TtEWE-PvPDFcevLRcAGADVVPVpVYRW--iPpadqGpMDQLIeA----IVtaSL---DC-VTFTSAPAV---ASMLmRAKEtgLlEgVLhAL-R-T-rVlpaCVGPITAaPLeE---lG-V-P-TS-m-Pg------Ra-------RL---G----A--------------------LARH--V-----A---EELP----rr---AN-r-IQAAGH----------T----------ISVRGgcVV-V--Dg-QVRq--L--APApMA--LMRSLARQPGrVVSReDLL-a-AL------PG---g--G--E--D-------T--H--AVET-AIaRLR-----AGL----G----t-----p-K----a-----IqTVVKRGYRLALD-T..... gi|29831663|ref|NP_826297.1| putative transcriptional regulator ... e-103 .AQqdhGPLAGFtVGVT-AA-R-R--ADE-----Lg----ALLQRRGASVvhAP--ALRIV---pLaD-DSELlaaTKGLIeQaPDVVV--AtTAIGFR-GWI---------eAADGW---G-------LGEDLIErLrGVE-LLARGPKVkGAVRAAGLtEEWSPSSESmaEV--LDrL--LEEG--VD-gr-RVAIQLHG------E-PLPgFVeALRaGGAEVVgVpVYRW--mPpeditpvDRLLdA----tVtRgL---DA-ITFTSAPAA---ASLLSRAEErgLlSDVLAAL-H-h-DVlpaCVGPVTAlPLqa---RG-V-d-Tv-q-PE------RF-------RL---G----p--------------------LVQl--L-----C---KELP----gr---Ar-T-LpiAGH----------r----------VEIRGhAVM-V--Dg-ALRP--V--pPAGMS--LLRALARRPGwVVARAELL-R-AL------PG---a--G--r--D-------e--H--AVET-AMaRLR-----TAL----G----a-----p-K----L-----IqTVVKRGYRLALD-paaD.. gi|21221403|ref|NP_627182.1| putative transcriptional regulator ... 5e-99 ..QpghGPLAGFtVGVT-AA-R-R--ADE-----Lg----ALLgRRGAtVlhAP--ALRIV---pLaD-DgELMaaTKrIVdraPDVVV--AtTAIGFR-GWV---------eAADGW---G-------LGDaLLErLrTVE-LLARGPKVkGAVRAAGLtERWSPaSESmaEV--LDrL--LEQG--VA-gr-RIAVQLHG------E-PLPgFVeALReGGAEVVgVpVYRW--lPpedlGpvDRLLdA----aVsRgv---DA-VTFTSAPAA---VSLLgRAEErgLlpELLAAF-g-h-DVlpaCVGPVTAvPLqa---hG-V-d-Tv-q-PE------RF-------RL---G----p--------------------LVQl--L-----C---QELP----ar---Ar-A-LpVAGH----------r----------LEIRGhAVL-V--Dg-ELRt--V--pPAGMS--LLRALARRPGwVVpRAELL-R-AL------PG---t--G--r--D-------e--H--AVET-AMaRLR-----TSL----G----t-----p-K----L-----IqTVVKRGYRLALD-patD.. gi|23010960|ref|ZP_00051474.1| COG1587: Uroporphyrinogen-III syn... 9e-75 ........MAGctVlVT-Ad-R-R--kSE-----LA----AaLQRRGAEVrhAP--ALSMI---phaD-DEQLlaGTRdLVerPPDVVV--VtTGIGFR-SWV---------eAADAh---G-------LADRLLEvLADAR-IVARGPKArGAIQAAGLtaDWvaESETSaEI--aDvL--LgEG--VA-gl-RIAVQhHGAgADGlDvvFaE-------AGAEVAsLvVYRW--gPpPdpeALrasVeA----aAvgEI---DA-VVFTSAPGA---eAwLSaAEEhgVgrlVVSrF-Q-dgSMvAaAVGPVTARPLeH---RG-V-t-pl-q-PE------Rg-------RL---G----A--------------------LVRt--L-----V---aHye----qa---eTmA-LaTVAg----------T----------LQIRSrvAV-L--Dg-EVlP--L--SPSSLe--VLRlLAaRrGeVVTRdDVL-d-VL------PG---D--S--r--D-------p--H--AAEV-AVaRLR-----eAt----G----r-----R-D----L-----VkTVVKRGYRL.......... gi|15614725|ref|NP_243028.1| BH2162~unknown conserved protein [B... 3e-19 ........LSGYKVVLA-GT-R-K--TDE-----Ms----TLIEKQGG----TP--lVRsLqgtVFrv-DDEVlKDlETFISkgaDwaI--ltTGIGtN-tlV---------elAEri---G-------kkDEFLarLKEAN-IaARGyKTkNVIKqlGLQaEvvdNDgTvsgL--VaaM--egAd--VT-gk-RVmVQLHG------E-naPKLLAfLEekGADIqtLlpYRh--tPAk-eeTMaQFfqe----IeERaF---DA-VcFTAAiqV---reLFtyAKKnNMKDlLVeAF-Q-r-hViAVsVGkVTTEaLqd---EG-I-kriv-A-PK------le-------RM---GamivA--------------------LAsY--V-----q---EE.......................................................................................................................................................................................................... gi|52786576|ref|YP_092405.1| YjjA [Bacillus licheniformis DSM 13... 3e-19 ........LNGrRIAIg-AS-R-K--TDE-----Ms----TLIKKQGG----VP--lIRsLqgtVFla-EkEVgpDlRAFVetgaDwVI--ftTGIGtE-tlV---------SlAEkl---G-------IGERyLQAIrrAK-aaSRGyKTiAALKklGItpvaAdEDgTTkgL--IDsL--qShd--fS-gk-RVmVQLHG------E-naPSLLqfLEekGADVVPLlpYR---hvAPdreTvalLcSe----IiNREv---DA-VcFTTAvqV---rSLFHfAKEngyaEKIVqSF-Q-d-SVlAaAVGkVTAEaLrE---EG-V-erll-A-PD------le-------RM---G----A--------------------MivE--L-----A............................................................................................................................................................................................................... gi|47076789|dbj|BAD18331.1| unknown conserved protein [Geobacill... 5e-19 ..........GkRIALc-AS-R-K--lDE-----Mt----TLIEKQGGtAiirP--AqgtV----Fsk-gSELgEEmRTVIAmrPDwIV--ftTGIGFE-AlL---------eAADre---G-------MAaEwhRTIKEAN-VaARGyKTVtALKqiGVtpvaAsEDgTTkgL--IvaL--dghd--fA-dk-NVVVQLYG------D-taPaLrqfFlerGASyTeLlpYR---hvAPdekTLEtLyNe----VVgREv---DA-VcFTSAmqV---rffFSfAREkkeiapLLdAF-R-T-DVvAcAVGkVTKEaLeE---EG-V-drVi-A-PE------He-------RM---G----A--------------------M........................................................................................................................................................................................................................... gi|47076743|dbj|BAD18288.1| unknown conserved protein [Geobacill... 1e-18 ..........GkRIALc-AS-R-K--lDE-----Mt----TLIEKQGGtAiirP--AqgtV----Fsk-gSELgEEmRTVIAmrPDwIV--ftTGIGFE-AlL---------eAADre---G-------MAaQwhRTIKEAN-VaARGyKTVtALKqiGVtpvaAsEDgTTkgL--IaaL--yghd--fA-Ek-NVVVQLYG------D-taPaLkqfFleqGAlyTeLlpYR---hiAPdeeTLatLyke----IVgREv---DA-VcFTSAmqV---rffFSfAREkkeiapLLdAF-R-T-DVvAcAVGkVTKEaLeE---EG-V-drVi-A-PE------He-------RM---G----A--------------------M........................................................................................................................................................................................................................... gi|16078288|ref|NP_389105.1| yjjA [Bacillus subtilis subsp. subt... 2e-16 ........LlGkRVAIg-GS-R-K--TEE-----Is----TIIEKQGGipvirP--lqgtV---yLaE-k-QVEpDlRTFaeEkaDwVI--ftTGIGLE-tlV---------dmAEki---G-------LkDEFLQAIrQAK-aacRGyKTlSALKklGItpEaSdEDgTTRgL--IRsL--ephd--fS-gk-tVmVQLHG------E-kaPaLMAfLEekGASVLPIlpYQh--iP-PeeeTvERLcre----LmNdEv---DA-VcFTTAiqV---rSLFDfAKgrgyiNEVkkVF-E-e-rAiAaAVGkVTAEaLrE---EG-I-trll-A-PE------ie-------RM---G----A--------------------MivE--L-----A---K........................................................................................................................................................................................................... gi|27381067|ref|NP_772596.1| blr5956 [Bradyrhizobium japonicum U... 3e-15 ........LNGYRIlIl-ET-R-E--eaQ-----Fs----kLLaEQGADVvQCP--mFtIh---daPD-papVEawiRraIdrPfDdLV--lmTGeGLR-riM---------klARtr---G-------LdQaLVaALAKSR-kFTRGPKpgkALReiSLEaQqTtEKpTTEgV--IEmL--gKld--LK-gr-RLGLQLYpd-kD-----hstLtGALsaqGAEVdtVlpYvY--dskaadAnIvaaIdd----MAEgRI---DS-IALTNlgqV---rrLIEaAKahgsEaKLrAGL-E-r-tLiA-sVGPAVSgeLaa---hG-L-r-TDiA-PaedayfmRp-------lI---S----A--------------------MAaa--L-----A---EKrP........................................................................................................................................................................................................ gi|39937093|ref|NP_949369.1| Uroporphyrinogen III synthase HEM4 ... 5e-14 ........LqGtRIlIl-ET-R-E--eaQ-----FA----rLLtEQGADVlQCP--mFEIr---daPD-papVSawiDrLIAaPfDdLV--llTGeGLR-rlt---------klARAt---G-------reRpFVaAVGrTR-tFiRGPKpgrALReiGLEpQvTaEApTSEgV--aatL--kRyd--LA-gr-RIGVQLYpe-rD-----haaLLdSItaqdAtVdaVlpYsY--daraaeqTvvtaVee----MAQgRv---DA-LALTSSgqV---rrLFDvARahDcEDRLrdGLsR-T-pIaS--VGPVVTEeLaa---hGfA-P-Ti-T-P........................................................................................................................................................................................................................................................................... gi|32475041|ref|NP_868035.1| uroporphyrinogen III synthase, urop... 2e-13 ..........GlRVAAl-ES-R-R--ADD-----Mt----rLIcKfGGEAfvSP--SMReV---pIep-NraaiDfAyrIITgdigIVI--VmTGVGFR-ylL---------kATEkh---v-------dqQRLIDALSDit-tIcRGPKpVAVMRefGLKpthrvpEpNTwRe--Llqt--IDAGipIA-Nq-tIGIQeYGV-SNK------QLIAGLEarGAiAesVKVYgW--EfpedtqpLkanTlA----LAEgEr---Di-LlvTSAhqV---VnLLRmAEDLgVSDSLrdGL---S-kTaiVsIGPTTSdmLrE---hd-L-a-iAme-PS------Hp-------KM---G----h--------------------LVsE--s-----A---RDakr---LV---dEvr-aRSSGs----------q----------sStsqTSVs-LraDD-S.............................................................................................................................................. gi|46198620|ref|YP_004287.1| uroporphyrinogen-III synthase [Ther... 5e-13 ............RIAyA-Gl-R-R--kEE-----Fk----ALaEKlGftpllfPvqAtEkV---pVPEyrDQVRE-----LAQgvDLFL--AtTGVGvR-dlL---------eAGKAl---G-------L--DLegpLAKAf-rLARGaKAArALKeAGLppHavgDGtS--Ks--LlpL--LpQG-----Rg-vaALQLYG------k-PLPlLeNALaerGyRVLPLmpYRh--lPdPeGiL--RLeeA----VlRgEv---DA-LAFVAAiqV---efLFEgAKD---pkaLreAL-N-T-rVkALAVGrVTAdaLrE---wG-VkP-fy-V-dE------te-------RL---G----S--------------------L........................................................................................................................................................................................................................... gi|23473894|ref|ZP_00129189.1| COG0007: Uroporphyrinogen-III met... 1e-08 .......PLlGrgIVVT-rA-ReQ--ASg-----LA----AsLtQlGAEViQfP--TIlIr---pLeD---------yApVhDairrLA--eYdwLvFt-Svn---------GVkHfWqqmG-------LlGldsRALGGVK-VaAiGPaTAdVLRekGIEpDFiPEKyvAEgV--VKgM--IErG--MD-gS-RVl--LprA-rvArE-vLPEeLAr---AGARVdvLpVYEt--vPGdaNr--SHVLem----LeEgRI---DC-ITFgSSsTV---dnfFSl-----VEpEaMrry-E---hVHmaCIGPVTrKtLeR---yG-f-t-cSiq-PE------dy-------tI---p----A--------------------LVdE--L-----V---RQL......................................................................................................................................................................................................... gi|46579147|ref|YP_009955.1| uroporphyrinogen III synthase/methy... 3e-08 .......PLlGkgVVVT-rA-ReQ--ASg-----LA----AaLRElGADViQfP--TIdIh---pLdD-yapVHEaiRAL--DtyDwVV--ftSvnGvK-hFw---------nqlaAl---G-------LdSR---ALGGrK-VaAiGPaTAdALRdkGIapDFiPEKyvAEgV--VEgM--LarG--MG-gk-R--VlLprA-lEArE-vLPE---eLRkAGAtVdvLpVY----vtVPsAArrDdVLAr----MeagEv---hC-VTFgS-------SSTVENffSLvpaDtVkA---H-p-EVklaCIGPVTKKtLeg---fG-f-t-chiq-PD------dy-------tI---p----A--------------------LVdE--L-----T---RvLP----eL.................................................................................................................................................................................................. gi|50876623|emb|CAG36463.1| probable uroporphyrinogen III syntha... 9e-08 .......PLfGkKIiVT-rT-ReQ--ASE-----Lv----qeLEEQGANclECa--TIKIs---pIkE-pkELDNalErLqefhwiLFT--SiNGVkYf-fer---------lfSKGm---d-------arD-----LKGCd-IavvGPSTAdyLRkyGLNaDlfPpvfTGEgL--aQaL--LDQG--VE-gr-NIlIpr--A-qQArE-ivPE---NLRgAGAQVTvapVYvt--K--PIAenkkEMrAe----Lesgtv---Dm-VTFTSSsTV---TnfIKmlQpeSpEE--LASL-l-k-gVRiaAIGPITAKtVtd---NG-L-q-VD-VqPE------Ny-------tI---A----G--------------------Mlda--I-----V---E........................................................................................................................................................................................................... gi|49235877|ref|ZP_00329941.1| COG0007: Uroporphyrinogen-III met... 3e-07 LAwlEDkPLfGrRViVT-rp-RaQ--AEg-----Lt----rsLadlGAEViNfP--VIRte---ppaD-whpLDTalDAIgefdwiIFT--SaNGVrYf--Wr---------rllE--------------rHQdIRSLAGiR-IaAiGPaTSrALKerGLltDWQP-----REy--Vaea--VaSG--LGpRV-RgrrvLlpr-ADiar-PF--LavdLRrqGAEVTeVtAYRtvkNeenaGSLkEmLAAG--------Kv---aA-VTFTSSsTV---rAf------LDLlgDgaldL-v-q-gIdVFCLGPVTAatarE---aG-L-q-VA-A............................................................................................................................................................................................................................................................................. gi|23112384|ref|ZP_00097873.1| COG0745: Response regulators cons... 7e-05 ..................................................................................................................................................................................................................................................................................SA---TpVImlTaKVELEDRL-qGL-N-l-gAddyiVkPfSpReVVa--------------------------------RI---k----A--------------------VlRR--t-----h---iEta----LL---ADsi-tydnGl----------T----------IDnarhEVr-f--QD-EAil--L--TPTeFk--ILgALAkyPGrVySRGQLV-Q-IV------qG---hdfG--G--D-------e--R--VIDA-hIkKLR-----qkLegvpG----D-----p-K----I-----IlTVygvGYK........... gi|12655814|gb|AAK00606.1| uroporphyrinogen III synthase/methylt... 3e-04 .......PLfGkRIlVT-rA-RsQ--ASK-----Lt----AkLEKlGAEVlEAP--AISM----AdPa-D-----NyaAL-----DkaI--dH--VAdy-hWLif-------TSANGv---GrffarlfkAGKdaRALGyAK-IaAiGlaTAekLKqyGLvaDviPQEyrAEgV--LEaL----KG--kl-pp-HakIlIprA-eEArE-vLPD---tLRemGAEVevapAYRt--icGqVdG--EaLAAe----LkEgNI---Dl-VTFTSSsTV---knLVNiigSaEV----LkGV-K-T-----aCIGPVTA................................................................................................................................................................................................................................................................................................ gi|48845542|ref|ZP_00299820.1| COG0007: Uroporphyrinogen-III met... 4e-04 .......PLfGtsIlVTrAA-d-Q--AgE-----Fg----AMLgalGARVlECP--TIaIV---ppeS-wDNLDaaiaSLdrfhwaVFT--SvNAVrFf-fer---------lAAaG---------------KdsRALGNCR-VcAvGPKTAAALapfGIRpDliPaDyKGEgV--VEvF--rSEe--IA-gk-RIifpkgdr-Ar--D-vIPQgLAeL--GGevTAPVayrNv--tPdsLpA---gVIAe----LeERRI---tC-VTFTSSsTVenlAAILgENRfLh--------L-l-k-gVtiaAIGPITARtcrE---lG-L-e-Vh-VePS------Ky-------tL---A----A--------------------M........................................................................................................................................................................................................................... gi|16125553|ref|NP_420117.1| DNA-binding response regulator [Cau... 5e-04 ...................................................................................................................................................................................................................................................................................................................................................................---G----l--------------------VrRa--a-----G---RtsP----VI---G------AGrl----------A----------LDtRrmSAt-L--Dg-Apir--L--SPleFr--LLdCLAHNPGrAVSaGELa-E-qL------yGva-D--t--A--D-------T--N--AIEA-lVaRLR-----rkI----G----------a-D----V-----IeTrrgfGYlLA......... gi|33240533|ref|NP_875475.1| Two-component response regulator [P... 6e-04 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--SPreFA--LLcALLmpPGmVrSRhELL-R-Maw-----Pp---f--S--G--g-------p--R--SVDT-qVLtLRrkleqAGL----G----D-----g-G----g-----ITTVrQQGYRFSLD-S..... gi|33861669|ref|NP_893230.1| two-component response regulator [P... 8e-04 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................-SeKPveL--SPreFA--LLcALLmpPGmVrSRqELL-R-Law-----Pp---f--S--G--g-------p--R--SVDT-qVLtLRrkleqAGL----G----E-----g-G----g-----ITTVrQQGYRFSID-S..... gi|33865438|ref|NP_896997.1| two-component response regulator [S... 8e-04 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................Vt-L--rD-Qpve--L--SPreFA--LLcALLmpPGlVrSRqELL-R-Maw-----Pp---f--S--G--g-------p--R--SVDT-qVLtLRrkleqAGL----G----E-----g-G----g-----ITTVrQRGYRFSLD-T..... gi|48837122|ref|ZP_00294117.1| COG0745: Response regulators cons... 8e-04 ..........................................................................................................................................................................................................................................................................................................................................................-------RV---r----A--------------------LARR--s-----V---ppLP----pVlrrqGiT-LdpANH----------T----------VErdGrpV-----------s--L--TPKeFA--VLEVLMRanGAVVSaekLL-E-ka------wd---E--N--A--Dpf-----T--N--VVrV-TVMtLR-----kkL----G----D-----p-p----V-----IhTVqgaGYRI.......... gi|39998375|ref|NP_954326.1| uroporphyrinogen III synthase/methy... 0.001 .......PLfGrsImVTrAA-d-Q--AgE-----Fs----VMLRslGARVlECP--TIaIa---ppeS-wDDLDSaiSrIdTfdwaIFT--SfNAVrFf-fqr---------ldAaGr---d-------s-----RALGACR-IcvvGPKTAeALapyGIRpDlvaaDyKGEgV--IEaL--rDvp--LA-gk-RVlfpkgdr-ArDvi-P-----tGLaafGAHVeapvAYR---NaAP-----DaLpAGtieeLedRRI---hC-VTFTSSsTVqnlAAILgENRmLhLlEgVIiA-----------sIGPITSRscrE---lG-L-q-Vhie-PQ------Ey-------tL---A----A--------------------L........................................................................................................................................................................................................................... gi|21911418|gb|AAM80541.1| VanRst [Streptomyces toyocaensis] 0.001 .........................................................................................................................................................................................................................................................................................................................................................L-------RI---r----A--------------------LdRR--r-----A---HirP----pV---r-----EiAGl----------r----------LDpfrrEVy-r--DD-ryia--L--TrKqFA--VLEVLVaaeGGVVSaeELL-E-ra------wd---E--N--A--Dsf-----T--N--AVri-TVsaLR-----krL----G----E-----p-Q----I-----IATVpgvGYRIA......... gi|15678194|ref|NP_275309.1| uroporphyrinogen III synthase [Meth... 0.002 ...................................................................................................................................................GPRTArVagehGLRvDivPEDyTAEgL--LDaL--tglN--IE-gw-KVALprtlS-ArKvl-P-----rGLEMmGAEVLvaEAYRs--glpedtGpaEELIdG----LldgKv---DA-VTFTSplTV---enLFKiAgNr--RkELIeVL-K-r--VkVaAIGPITlRkLeE---hG-I-t-Av-T-PE------Rytvkd---mI---A----A--------------------LAvs--M-----G---EDV......................................................................................................................................................................................................... gi|40713148|emb|CAE53348.1| response regulator [Actinoplanes tei... 0.002 .........................................................................................................................................................................................................................................................................................................................................................L-------RL---r----A--------------------LdRR--r-----A---ySrP----pV---r-----EiAGl----------r----------LDpfrrEVy-r--DD-ryva--L--TrKqFA--VLaVLVaaeGGVVSaeELL-E-ra------wd---E--N--A--Dpf-----T--N--AVri-TVsaLR-----krL----G----E-----p-Q----I-----IATVpgvGYRI.......... gi|48848231|ref|ZP_00302477.1| COG0745: Response regulators cons... 0.002 ..........................................................................................................................................................................................................................................................................................................................................................-------RV---G----A--------------------VlRR--Vrpal-A---gEti----tV---GDlS-LdpTAH----------r----------VSrRGqpMk-V--------------GPTeFr--LLKhFMEHPGrVfSRGQLL-d-AV------wG---S--G--S--Die-----l--R--TVDV-hIrRLR-----qAIavp-G----a-----a-D----p-----VrTVrSaGYaL.......... gi|21224205|ref|NP_629984.1| two-component regulator CutR [Strep... 0.002 ..........................................................................................................................................................................................................................................................................................................................................................-------RV---r----A--------------------LGRR--t-----S---vpLP----pV--------LErAGi----------k----------LDpNrrEVF-r--Dg-Kevq--L--APKeFA--VLEVLMRseGAVVSaeQLL-E-ka------wd---E--N--T--Dpf-----T--N--VVrV-TVMtLR-----rkL----G----E-----p-p----V-----IVTVpgsGYRI.......... gi|29828947|ref|NP_823581.1| putative two-component system respo... 0.002 ..........................................................................................................................................................................................................................................................................................................................................................-------RV---r----A--------------------LGRR--t-----S---vpLP----pV--------LErAGi----------k----------LDpNrrEVF-r--Dg-Kevq--L--APKeFA--VLEVLLRseGAVVSaeQLL-E-ka------wd---E--N--T--Dpf-----T--N--VVrV-TVMtLR-----rkL----G----E-----p-p----V-----IVTVpgsGYRI.......... gi|19551523|ref|NP_599525.1| two-component system, response regu... 0.003 ..................................................................................................................................................................................................................................................GIaDfIVrG----LiREgF---ECeVTeSGAeAf---ArAhSgDfDLmVlDlgLphM-dgT-DVleQlrNlqVTlPIIv---lt-A-r-TN-i-eD------RL-------RtlegG----AddympkpfqfaellariklrLAKH--t-----p---QEtP----t----dArV-LRnGdl----------e----------LDLRtqrVL-I--Dg-Swhd--L--SrreVd--LLETLMRHPGqILSRvQLL-R-LVwdmdwdPG--------------------S--N--VVDV-yIraLR-----kkI----G----------a-H----r-----VeTIrgsGYRL.......... gi|20807256|ref|NP_622427.1| Response regulators consisting of a... 0.003 ......................................................................................................................................................................................................................................................................................................................................................................................................................................Gi----------V----------MDVHSrEVt-V--Dg-Kkie--L--TPKeFd--LLKlLLdNkGkVVSRekcL-N-eV------wG---y--dfyG--D-------l--R--TVDT-hIkQLR-----ekL----G----E-----KrN----L-----IkTVwgiGYKLegD....... gi|33863368|ref|NP_894928.1| two-component response regulator [P... 0.004 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................Vt-L--rD-Kpve--L--SPreFA--LLcALLmpPGiVrSRqELL-R-Maw-----Pp---f--S--G--g-------p--R--SVDT-qILtLRrkleqAGL----G----E-----g-G----g-----ITTMrQQGYRFSLD-TlpD.. gi|37676982|ref|NP_937378.1| response regulator [Vibrio vulnific... 0.004 ............................................................................................................................................................................................................................................................................................................................................................................--------------------LlaR--I-----e---aQLr----pL---GSsV-LSyAdi----------V----------VDVaNrSVL-h--NQ-Tpve--L--KPKeFq--LLlmLLQNPGrVyhRdELL-N-LI------wG---y--q--Sfpt-------T--R--TVDN-hILHLR-----qkL----p----Q-----l-D----I------eTLrgvGYRL.......... gi|54022660|ref|YP_116902.1| putative two-component system respo... 0.007 .........................................................................................................................................................................................................................................................................................................................................................L-------RL---r----A--------------------LdRR--r-----A---HSrP----pV---r-----EiAGl----------r----------VDpfrrEVy-r--Dg-ryva--L--TrKqFA--VLEVLVaaeGGVVSaeELL-E-ra------wd---E--N--A--Dpf-----T--N--AVri-TVsaLR-----krL----G----E-----p-w----L-----IATVpgvGYRIdTg-pdtDD. gi|21232747|ref|NP_638664.1| hypothetical protein XCC3318 [Xanth... 0.009 ......................................................................................................................................................................................................................................................................................................................................-I-P-SS-S-mg------RL-------RV---G----V---------------------------------------------------CT-vdVASR----------e----------VHVpGAK---------rTpr--L--APKALA--VLlALARQPGqVVTReQLL-a-eV------wp---D--t--l--p-------T--N--dVvTqAItQVR-----kAL----A----S-----d-G----sersahIeTIAKtGYRL.......... gi|46275285|emb|CAG25752.1| putative two-component system respon... 0.009 .........................................................................................................................................................................................................................................................................................................................................................L-------RL---r----A--------------------LdRR--r-----A---HNrP----pV--------LEiAGl----------r----------LNpfrrEVy-r--DD-ryia--L--TrKqFA--VLEVLVsadGGVVSaeELL-E-ra------wd---k--N--A--Dpf-----T--N--AVri-TVsaLR-----krL----G----E-----p-w----I-----ITTVAgvGYRI.......... gi|15601024|ref|NP_232654.1| transcriptional regulator [Vibrio c... 0.015 ............................................................................................................................................................................................................................................................................................................................................................................--------------------LlaR--I-----e---aQLr----pL---GSsV-LSyAdi----------V----------VDVaNrSVL-h--NQ-Tpve--L--KPKeFq--LLlmLLQNPGrVyhRdELL-N-LI------wG---y--qyfp--t-------T--R--TVDN-hILHLR-----qkL----p----Q-----l-D----I------eTLrgvGYRL.......... gi|21224667|ref|NP_630446.1| putative two-component regulator [S... 0.015 ..........................................................................................................................................................................................................................................................................................................................................-TE-l-aa------RL-------R----A----A--------------------LkRa--a-----p---ppsa----ta---GDlA-LdAVrH----------V----------VSVRGTrV-----------d--L--TPTeFr--LLaALMaasGNIVrRrELV-R-Aa------wp---E--G--A--Q-------V--HenTLDq-yLtRLRrkl--rAa----G----S-----d-R----t-----IGTArgiGHRLS......... gi|15805812|ref|NP_294510.1| uroporphyrinogen-III synthase, puta... 0.020 MSSAdSlPLqGHtVAVT-rp-d-s--GgDggggrLg----eLLRaQGAEVlSVP--lIRFL---ppaD-praLwSGlRdLrGvdwlLVT--SpqGgrLl-Gea---------lAAaG-----------------VaDLAGTR-LaAvGeaTAreLRArGLpvDFlPtTaTAlSL--gRkLp-aQpG--qA-al-HLTsQLsen-T---------LrGeLaarGVtyrrLELYHt--aPAvLNAAervaLAG----VS--------A-VTLASGsAA........................................................................................................................................................................................................................................................................................................................................ gi|20808829|ref|NP_624000.1| Response regulators consisting of a... 0.020 .........................................................................................................................................................................................................................................................................................................................................................M-------RV---k----A--------------------IlRR--t-----T---DDVP----La---evmS-FNnddl----------V----------VDLRAhTVr-k--kg-vVvn--L--TPNeFk--ILKiLIRNPNrVfTReELI-E-kV------mGfdyE--G--y--D----------R--TIDA-hIkNLR-----qkI----e----Ddt---K-Npv--y-----IkTVygvGYK........... gi|54024784|ref|YP_119026.1| putative two-component system respo... 0.020 .........................................................................................................................................................................................................................................................................................VLRQlREVSsvpvLIlTa-R-S-DeRSVvrGlrgGaddyl---vk-p-P-ri-A-el------ma-------RL---e----T--------------------VTRRaaV-----A---aQpPrrevVt---GDvr-vdlVAR----------V----------VEVaGSpV-----------P--L--TqKeFe--LVEALVERPGAAVSRqQLM-d-rI------wG---D--AfvA--v-------S--R--SLDV-hMtgLR-----AkL----N----r-----p-G----L-----ITTIrgyGYR........... gi|987095|emb|CAA60455.1| response regulator [Streptomyces hygro... 0.020 ..................................................................................................................................................................................................................................................................................................................................................................L---v----A--------------------rVRt--L-----S---RRaP----kq---pptV-LRfASi----------T----------LDetrrEVs-V--Dg-rple--L--TPKeLA--VLHlLLvagGApVSHdELV-R-TV------wd---E--h--l--Dpr-----T--s--AVrA-TVsRLR-----gkL----G----D-----p-G----L-----IlAdkgEGYRL.......... gi|53731450|ref|ZP_00148607.2| COG1587: Uroporphyrinogen-III syn... 0.020 ...................................................................................................................................SKFIDALNNTN-VVAiGPtTrkqLEGiGIgvmgmPgvySSEgL--VEYL--cpDv--kG-K------QIdtA-rSAYg-s-slLISGLRdCGANVLetKVYt---ltlPkGpLqDELITk----sVNgEI---DV-fAFTSSmmV---rSfFDRAEaLcegkSIreVL-E-N-SLvA-AIGipTANtLkE---yG-V.................................................................................................................................................................................................................................................................................... gi|32141210|ref|NP_733611.1| putative two-component system respo... 0.026 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--TrKqFA--VLEVLVaaeGGVVSaeELL-E-ra------wd---E--N--A--Dpf-----T--N--AVri-TVsaLR-----krL----G----E-----p-G----I-----IATVpgvGYRI.......... gi|24373267|ref|NP_717310.1| transcriptional regulator [Shewanel... 0.026 .........................................................................................................................................................................................................................................................................................................................................................................................................................M---SDsT-FflGew----------q----------VNpsANSLL-L--gk-QVKq--L--EPKAMd--VLlfLcQNaGeVVSsdEIVsH-cw------PG---v--d--T--g-------d--N--pLhk-iInQLR-----rAL----G----Dsate-S-R----y-----IeTIrKRGYRtlAE-vR.... gi|26991917|ref|NP_747342.1| DNA-binding response regulator, Lux... 0.026 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................----------VSLErrEVF-V--Dg---KP--I--llGGrAfdVLaTLIRakGrVVGKdELFsQ-Vw------sG---t--v--v--E-------d--N--nLQV-qVslLR-----kAF----G----D-----R-G----L-----IqTVpRRGYRLA......... gi|7481668|pir||T36699 probable two-component response regulator... 0.026 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--TrKqFA--VLEVLVaaeGGVVSaeELL-E-ra------wd---E--N--A--Dpf-----T--N--AVri-TVsaLR-----krL----G----E-----p-G----I-----IATVpgvGYRI.......... gi|21240914|ref|NP_640496.1| transcriptional regulator [Xanthomo... 0.033 .......................................................................................................................................................................................................................................................................................................................................................................................................-----S---ERVt----qL---GSvprFRlGpl----------L----------VEpErlTLI-d--Dg-rTit--L--EPrmMe--VLiALAERaGeVISaeQLLiE-Vw------hG---S--f--y--g-------d--N--pVhk-TIaQLR-----rkL----G----D-----d-SrqprF-----IeTIrKRGYRL.......... gi|48834651|ref|ZP_00291657.1| COG0745: Response regulators cons... 0.033 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................----------VDLNqrQVe-V--gg-rkvP--L--TyKeFe--LLRVLIERPGhVVSRAEIM-H-kV------wGyt-p--e--S--D-------T--R--TLgV-hMVsLR-----rkL----A----l-----p-S----L-----IeTVrgvGYRI.......... gi|46131698|ref|ZP_00202667.1| COG0745: Response regulators cons... 0.033 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................----------IDtaGrSVM-r--gD-Ahvd--L--TaSewA--LLEALIQRPGmIVSRSrLe-d-rL------yS---f--N--E--Eig-----S--N--TIEV-hMsRLR-----kkL----G----------a-D----V-----IeTLrglGYRLkrD....... gi|13473153|ref|NP_104720.1| regulatory protein, VirG protein [M... 0.044 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--SPGqVA--LLRlFLasPrkVLTRdDII-a-Aa------PA---E--N--A--D-------AfdR--SIDS-rIVRLR-----rkL---------D-----t-E----t-----ITTIrgaGYR........... gi|20091852|ref|NP_617927.1| uroporphyrinogen-III synthase [Meth... 0.044 ........LTAeKIpLl-Ai-m-R--pES-----yrekseAIaRdyGfEpvyVP--mIQLe---GLkD-E-vFEpfVQrVVkgtsDyVVftSaNGItFtldkL---------TkpE--------------kEKFIaALKKTR-VIAiGPNTekeLvkiGIEKpFlPgDySSEgI--VEaL--cpEv--kG-KTidLArSafGA---------kvLIeGLEqCGAtVyetHVYtl--S-iPeGAAqkELIer----tlagEv---DA-fAFTSSmmV---rGfMKHAEKLgaKDtIkeTL-s-r-aV-VgAIGtpTGNtLeK---yG-V-n-AD-ViPE------EF-------tF---e----A--------------------LVK......................................................................................................................................................................................................................... gi|29831247|ref|NP_825881.1| putative two-component system respo... 0.057 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................----------IDtEGmEVr-r--Sg-Qpva--L--TPTeMr--LLleFssaPGtVLSRdkLL-E-rVwd----yG---w--G--G--D-------T--R--VVDV-hVqRLR-----TkI----G----Q-----d-R----I------dTVrgfGYKL.......... gi|46192928|ref|ZP_00207493.1| COG0745: Response regulators cons... 0.057 .....................................................................................................................................................................................................................................................................................................ELLAeL-R-A-arEAVpVlvLTARdrLddrvRG-L-d-lG-A-dD------yLgkpfeleEL---A----A--------------------rlRa--L-----G---RRpa----aL---ATtr-pEwnGv----------A----------LDLaAmEAs-r--Dg-rpva--L--SPreFA--VLRALMaHPrAILSKAQIe-E-qL------yGwq-E--e--i--E-------S--N--AIEV-hVhKLR-----AkL----G----------h-G----F-----IeTVrgvGYRLA......... gi|52007097|ref|ZP_00334475.1| COG1587: Uroporphyrinogen-III syn... 0.057 .......PLAGrtIlVT-rApR-Q--Aaa-----Ls----AaIRaaGGSAfEfP--ALaFe---AVPv-D-RLQaSlaqVVAadfvIFV--SpNAaeF-----------------------G-------MA--aIgSLAAGRsVLAvGPgTArALaAqGLdaviTPDGQDSEaLlaLpqL--LDvd--gK-RV-vIVrgIgGr-AllgD-t-------LaarGAEVhyMEcYR---RlAPtAdAap-LIAr----wqaggI---DA-VTvASA........................................................................................................................................................................................................................................................................................................................................... gi|48770187|ref|ZP_00274531.1| COG0745: Response regulators cons... 0.057 ..........................................................................................................................................................................................................................................................................................................................................................-------RV---S----A--------------------VARR--y-----AgnpNpLv----nL---GDlr-IdTAGH---------------------------SVM-r--gE-Trvd--L--TaSewA--LLEALIQHPGmIVSRArLe-E-rL------yS---f--N--E--Evg-----S--N--TIEV-hMsRLR-----kkL----G----------a-D----V-----IeTLrglGYRLrrD....... gi|48766961|ref|ZP_00271332.1| COG0745: Response regulators cons... 0.057 ..........................................................................................................................................................................................................................................................................................................................................................-------RV---e----A--------------------MARd--V-----r---aDag----sL---------ElAGl----------A----------IDplArEAa-V--Dg-Krld--L--TPreFd--LLyyFARHPdkVfSRmDLL-N-AV------wG---y--q--h--Egy-----e--H--TVNT-hInRLR-----TkIevdpA----Q-----p-K----r-----IlTVwRRGYRFVAD-pQaD.. gi|53683311|ref|ZP_00101434.2| COG0745: Response regulators cons... 0.057 ..........................................................................................................................................................................................................................................................................................................................................................-------RL---r----A--------------------LiRR-------------Err----qV---GGeV-LKVAdl----------V----------LDpaSlrVt-r--gg-Selq--L--SPiGLr--LLtiLMREsprVVSRqEIe-R-eI------wG---N--Gl-p--D-------S--d--TLrS-hLyNLR-----kTI----dkpf-D-----K-Q----L-----LhTVqSaGYRVAdi-SQppD. gi|29826613|ref|NP_821247.1| putative two-component system respo... 0.074 ........................................................................................................................................................................................................................................................................................................................................................................................................................................----------V----------LDVaArTcL-r--Sg-vAvP--L--TPreFA--VaEVLARRPGeAVTKSEILhH-Aw------Pd---E--A--E--D-------l--N--lVEV-rVsaLRrkid-TAF----G----r-----Q-S----L-----L-TVrgvGYRLVdD....... gi|46106036|ref|ZP_00199794.1| COG0745: Response regulators cons... 0.074 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--SPreFk--LLyTLARsPGrVfpRGtLL-R-qV------wG---E--d--EyiD-------e--R--TVNV-yVqRLR-----NkL----GddpsD-----p-K----L-----IeTVrgfGYRL.......... gi|21221787|ref|NP_627566.1| two-component system response regul... 0.097 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--TPTeMr--LLleFssaPGtVLSRdkLL-E-rVwd----yG---w--G--G--D-------T--R--VVDV-hVqRLR-----TkI----G----Q-----d-R----I------eTVrgfGYKL.......... gi|54030700|ref|ZP_00362836.1| COG0745: Response regulators cons... 0.097 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................D-QVle--L--TPreLA--LLQTLIvKPGhAVSKerLF-ElVF------PG---E--A--Dv-Q-------y--E--AVEV-VVyRLR-----kkL----A----h-----t-G----Vt----LVTLrglGYlLkVD-A..... gi|49235766|ref|ZP_00329831.1| COG0745: Response regulators cons... 0.13 ......................................................................................................................................................................................................................................................................................................................................................................................................................................Gl----------V----------IDIpArEVk-V--DgrTIgn--L--TPKeFd--LLlfLARHPGqVMSRekIL-E-kV------wG---y--dfyG--D-------l--R--TVDT-hIkNLR-----ekL----G----r-----E-H----aw----IATVwgvGYKFeVg-S..... gi|16125434|ref|NP_419998.1| DNA-binding response regulator [Cau... 0.13 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--SsGeFS--LLRAFVERPqrVLTRdQLL-d-La------rG---r--d--S--D-------A--YdrAIDV-qIsRLR-----rkLddg-G----g-----S-E----L-----IrTIrSEGY............ gi|46199531|ref|YP_005198.1| probable two-component response reg... 0.13 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--SPKAFl--LLKAFLEaPeeVLSKeaLM-R-kV------wG---E--e--v--E-------p--a--TLEV-hLsaLR-----kAL----G----E-----p-S----p-----IqTVrgyGYRL.......... gi|21244171|ref|NP_643753.1| hypothetical protein XAC3446 [Xanth... 0.13 ........................................................................................................................................................................................................................................................................................................................................................................................................................................----------V----------VDVaSrEVh-A--pg-AkRP--LrlAPKSLA--VLlTLARQPGqVVTReQLL-a-eV------wp---D--t--l--p-------T--N--dVvTqAVtQLR-----kAF----A----ShggqrS-E----h-----IeTIAKtGYRL.......... gi|32487234|emb|CAD91201.1| putative response regulator [Nonomur... 0.13 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................P--L--TtKeLA--VLEhLLtarGrVVSaeELL-E-rV------wd---E--q--A--Dpf-----T--t--TVkA-TInRLR-----SkL----G----Q-----p-p----V-----IeTVpREGYRI.......... gi|46313707|ref|ZP_00214296.1| COG0745: Response regulators cons... 0.13 ..........................................................................................................................................................................................................................................................................................................................................................-------RV---d----A--------------------LARd--s-----r------------I---dAgT-LdVAGl----------A----------IDpiArEAs-V--Dg-Arid--L--TPreFd--LLyfFARHPGkVfSRmDLL-N-AV------wG---y--q--h--Egy-----e--H--TVNT-hInRLR-----AkIeadpA----E-----p-v----r-----IlTVwgRGYKLAAp-GQRD.. gi|46324380|ref|ZP_00224741.1| COG0745: Response regulators cons... 0.13 ..........................................................................................................................................................................................................................................................................................................................................................-------RV---d----A--------------------LARd--s-----r------------L---dAgT-LdVAGl----------s----------IDpiArEAs-V--Dg-Trid--L--TPreFd--LLyfFARHPGkVfSRmDLL-N-AV------wG---y--r--h--Egy-----e--H--TVNT-hInRLR-----AkIeadpA----E-----p-v----r-----IlTVwgRGYKLAAp-GQRD.. gi|15807683|ref|NP_285335.1| uroporphyrin-III C-methyltransferas... 0.17 .......PLqGaQVAVT-rT-R-EqtGSE-----LA----ALLsgRGAQVsEiP--lLRFV---p----------------ASsPrtLV--GalN-GFd-GWVlltseqavrAlARtl---l-------aAGRdLRvLArAR-IaAvGsgTAwTLReyGLapDFvPtrSGSRH---------LgAe--Lp-aA-pgeVaLHvG-SQDtD-avlEM--ALsarGiEyVaaEAYRs--ElSeL--------Tp----aqREQLqeaQV-VTLASAvGA---rALaQ................................................................................................................................................................................................................................................................................................................................ gi|52786195|ref|YP_092024.1| hypothetical protein BLi02455 [Baci... 0.17 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................--Dg-AAve--L--TPKeyd--LLmTLVdHrGkVfTRSELL-E-fI------wG---y--dffG--D-------T--R--TVDT-hIqRLR-----kkL----d----a-----S-D----L-----IkTVfgiGYK........... gi|42522577|ref|NP_967957.1| DNA-binding response regulator PhoB... 0.17 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--TPSeFk--LLgALVQNhGcVLTReQLI-E-nI------qG---E--G--i--N-------VvgR--TIDT-hVFgLR-----kkL----G----Ew----g-D----r-----IeTIrgvGYRVkVD....... gi|28869448|ref|NP_792067.1| KDP operon transcriptional regulato... 0.17 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................----------VDLayrrVL-L--DD-leva--L--TrKeyS--VLaqLARyPGrVITQqQLL-K-dIwg----Pt---h--A--E--D-------S--H--yLri-VVgHLR-----qkL----G----Ddpta-p-R----F-----IiTeAgiGYRLlAD-S..... gi|21229592|ref|NP_635509.1| transcriptional regulator [Xanthomo... 0.17 .......................................................................................................................................................................................................................................................................................................................................................................................................-----S---ERVt----qL---GSvprFRlGpl----------L----------VEpErlmLI-g--Dg-Erit--L--EPrmMe--VLvALAERaGeVISaeQLLid-Vw------hG---S--f--y--g-------d--N--pVhk-TIaQLR-----rkL----G----D-----d-SrqprF-----IeTIrKRGYRL.......... gi|10880475|gb|AAG24269.1| BasR [Neisseria cinerea] 0.17 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--SnKeFA--VLQALLaRPGvILSRSDLe-d-kI------yG---w--G--AevE-------S--N--AVDf-lIhaLR-----kkL----G----k-----E-N----I.......................... gi|46316522|ref|ZP_00217101.1| COG0745: Response regulators cons... 0.17 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................Ia-A--DN-TViP--L--SnAeFr--LLNAFLaaPGrVLSReyLM-d-Ta------rG---k--S--i--D-------TfdR--SIDV-qIsRLR-----qkLredik----E-----p-R----L-----IrTIrgEGYmLdVg-hR.... gi|46130960|ref|ZP_00202415.1| COG0745: Response regulators cons... 0.17 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................RAgTVt-V--Dg-AAvv--L--TaheFk--VLdyLMHHPGAIVSKStLt-E-hI------yA---Qdfd--r--D-------S--N--TIEV-fVgRLR-----rkL----G----------v-D----V-----IeTVrgQGYRL.......... gi|32469244|dbj|BAC79018.1| repressor-response regulator [Strept... 0.22 ........................................................................................................................................................................................................................................................................................................................................-P-yS-f-rE------lMa------RI---d----A--------------------VmRR--V-----G---aRIg----gq---rrpT-LSrGGl----------s----------LDsESrEVV-L--Dg-rpiP--L--TrKeFd--LLHyLAsRPGvVVSRqrLM-i-dV------wG---h--p--A--DvglsaqaS--R--TIDT-hVssMR-----SkL----r----E-----S-G----w-----IlTVrgvGFRFrqD....... gi|46188475|ref|ZP_00124590.2| COG0745: Response regulators cons... 0.22 ..........................................................................................................................................................................................................................................................................................................................................................-------RL---k----A--------------------VlRR--a-----G------P----td---GEAp-IEVGGl----------L----------LDpiShrVt-I--Dg-Kpae--M--GPTeyr--LLQfFMtHqerAyTRGQLL-d-qV------wG---g--N--vyvE-------e--R--TVDV-hIrRLR-----kAL----G----Day---E-N----L-----VqTVrgtGYRFSTk-S..... gi|46200280|ref|YP_005947.1| two-component response regulator [T... 0.28 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................----------VDLEGrrAy-L--Eg-Eplr--L--SPTeMn--LLlVFAQaPGrVfTRGELL-E-rV------wGpefE--G--S--E----------R--VVDA-yVrlLR-----kkL----r----Ddpea-p-R----F-----IeTVVglGYRFlgD....... gi|34499298|ref|NP_903513.1| probable two-component response reg... 0.28 ......................................................................................................................................................................................................................................................................................................MLTSL-d-S-DMNqIlgleLgANdyIl---Kt-T-P-pS-V-lv------a--------RL---r----A--------------------qlRN--LrpaqaA---EaLP----ak---GSrk-avfGql----------s----------IDpvSrDVV-L--cg-EkiP--L--StSdFd--LLwlLAsHaGeTLNRdlLL-K-eM------rGvdyD--G--l--D----------R--SIDV-AIsRLR-----kkL----G----D-----N-p----sepfr-IkTVrNRGY............ gi|28872582|ref|NP_795201.1| phosphate regulon transcriptional r... 0.28 ..........................................................................................................................................................................................................................................................................................................................................................-------RL---k----A--------------------VlRR--a-----G------P----td---GEsp-IEVGGl----------L----------LDpiShrVt-I--Dg-Kpae--M--GPTeyr--LLQfFMtHqerAyTRGQLL-d-qV------wG---g--N--vyvE-------e--R--TVDV-hIrRLR-----kAL----G----Day---E-N----L-----VqTVrgtGYRFSTk-S..... gi|48769647|ref|ZP_00273992.1| COG0745: Response regulators cons... 0.37 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--L--GPTeFr--LLHfLMtHPerVhSRSQLL-d-qV------wG---D--h--vfvE-------e--R--TVDV-hIkRLR-----AALtpg-G----y-----S-N----M-----IeTVrgsGYRLArS-psH... gi|52141934|ref|YP_084893.1| transcriptional regulatory protein ... 0.37 .....................................................................................................................................................................................................................................................................................................................................................................................................................................AGi----------e----------VNrlSrTVL-V--Dg-Eeii--L--ThKeFe--LLvyLMENkGiVLSRqhLL-d-qL------wG---y--dyyG--D-------d--R--TVDT-hIkKLR-----NkL----G----D-----KaK----h-----IGTVIRvGYK........... gi|49474029|ref|YP_032071.1| Two-component system regulatory pro... 0.37 ...................................................................................................................................................................................................................................................................................................................................................................................................H--L-----e---ElMa----rL---rAli-rRSAGHatsalccgavL----------LDtKtSrVF-V--Dg-QLik--L--TsyeFr--LLsyLMHHcGrVVSKtELt-E-hL------yd---Qdfd--K--D-------S--N--TVEV-fVgRLR-----rkL----G----------v-D----V-----IeTIrgmGYRVrI........ gi|39996204|ref|NP_952155.1| DNA-binding response regulator [Geo... 0.37 .........................................................................................................................................................................................................................................................................................................................................................................................................................V---GpvT-IdTerH----------M----------VaVEGdDVt-------------L--TtTeFk--LLlnLAERlGrVqSRdlLL-K-nV------wG---y--NyvG--D-------T--R--TVDT-hItRLR-----TkL----G----Q-----agE----L-----IkTVrgfGYKM.......... gi|30021702|ref|NP_833333.1| Two-component response regulator [B... 0.37 .....................................................................................................................................................................................................................................................................................................................................................................................................................................AGi----------e----------VNrlSrTVL-V--Dg-Eeii--L--ThKeFe--LLvyLMENkGiVLSRqhLL-d-qL------wG---y--dyyG--D-------d--R--TVDT-hIkKLR-----NkL----G----D-----KaK----h-----IGTVIRvGYK........... gi|28901287|ref|NP_800942.1| putative two-component response reg... 0.37 ..........................................................................................................................................................................................................................................................................................................................................................-------RI---k----V--------------------LVRd--L-----V---DEqs----Ia---dElV----AGR----------V----------kiIKSThqFwL--DQ-reiP--L--TkKeFS--FIEqLIlKPGkLIEQthLL-a-VI------wG---k--ShvE--D-------T--H--yLrV-lVsQLR-----kkL----N----Dsade-Q-R----L-----LkTepglGYRLVLEtSKH... gi|20094986|ref|NP_614833.1| Uroporphyrinogen-III synthase [Meth... 0.37 ..........................................................................................................................................SDVd-IaAvGPRTreALErAGLRvDvmPtEyTTgKL--aEeL--rQyG--Av-----LALRsRrr-TE-------DLrrtLEsyGVKAeeLEMYdl--KPkrV---------e----VnpRKF---DV-VcFlSAfTA---rCfLENvdptEIpEpVVS-------------IGPVTTKeLrR---aG-L-k-Vv-e-aE------Eh-------tV---e----A--------------------VAK......................................................................................................................................................................................................................... gi|13473197|ref|NP_104764.1| phosphate regulatory protein, PhoB ... 0.48 ........................................................................................................................................................................................................................................................................................................................................-P-fS-T-PE------fMa------RV---k----A--------------------LlRR--a-----k---pEVl----------SsV-LKVGdi----------V----------LDrEShrVy-r--kk-Seir--L--GPTeFr--LLEfMMRHPGrVfSRSQLL-d-nV------wG---E--tiyi--D-------e--R--TVDV-hVgRLR-----kAV----N----Ngrm--p-D----V-----IrTIrgaGYaIreD....... gi|32474591|ref|NP_867585.1| uroporphyrinogen III synthase/methy... 0.48 .......PLSGkNVlVT-rp-KdQ--ANQ-----LA----kpLEElGANVivqP--AIKIc-----Pp-DDwsEvDAaidqiEtfDsLV--ftSrnGvK-SFL---------drlldv---G-------rdmRcLgGLKiAv-V---GdaTANVLaTyhLRaDWiPESfDAdaL--LttLqnaEpp--LK-sT-lVVrtqRGr-dvvtD--------GLRaSGTQVreVvAYEn--wdVP---eMDpaTrGk---IdEQpL---Dw-ITLTS-PAT---ArnVHR............................................................................................................................................................................................................................................................................................................................... gi|28869425|ref|NP_792044.1| DNA-binding response regulator [Pse... 0.48 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................--Dg-lVvP--L--SnAeFr--LLRVFLERPhrVLSReQLL-d-Aa------rG---r--S--i--E-------AfdR--SIDl-lVsRLR-----qkL----G----Ddp---K-Npq--L-----IkTVrgEGY............ gi|27375405|ref|NP_766934.1| transcriptional regulator [Bradyrhi... 0.48 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................-V--Er-DgSP--L--QlSGrAfdILlALVRQaGNVVSKtELM-a-Ttw-----PG---a--A--v--E-------e--N--SLrV-hIaaLR-----kAL----G----D-----g-Ndgvry-----LSTVsgQGY............ gi|23012247|ref|ZP_00052379.1| COG0745: Response regulators cons... 0.48 ..................................................................................................................................................................................................................................................................................................................................................................L---S----A--------------------riRa--V-----V---RRaa----gr---ATAS-LEhGGi----------r----------LDLgSlTVt-V--Dg-AqiP--V--SrreFm--VLaALMERPSvLrSKAELe-d-rL------yGwq-E--e--i--E-------S--N--AVEV-hVhNLR-----AkI----G----------K-H----a-----IeTVrglGYRM.......... gi|15964767|ref|NP_385120.1| PROBABLE TRANSCRIPTION REGULATOR PR... 0.48 ...................................................................................................................................................................................................................................................................................................................................................................................................H--V-----e---EvLa----rI---rAli-rRAAGH----------AsseivcgpvrLDtKGSKAt-V--ag-vAlk--L--TsheFr--LLsyLMHHmGqVVSRtELV-E-hM------yd---Qdfd--r--D-------S--N--TIEV-fIgRLR-----kkI----G----N-------D----L-----IeTVrglGYRM..........