GDAP: Genomic Disulfide Analysis Program
Yeates Lab - DOE Center for Genomics and Proteomics
  Introduction
GDAP provides two services related to disulfide bond prediction by sequence to structure mapping. The first is pre-calculated disulfide bond predictions for over 100 microbial genomes. These predictions can be filtered and multiple genomes can be aggregated together. To access this functionality choose browse disulfide predictions below.
The second service is individual protein disulfide bond predictions. Users can submit their own sequences to the site and GDAP will identify possible disulfide bonds. To submit a sequence choose predict disulfides in a new sequence below.
 

Browse Disulfide Predictions (previous predictions)
Predict Disulfides In A New Sequence
 

References

  1. Mallick P, Boutz D.R, Eisenberg D, and Yeates T.O. (2002) Genomic evidence that the intracellular proteins of archaeal microbes contain disulfide bonds. Proc Natl Acad Sci., 15, 9679-9684.
  2. O'Connor B and Yeates T.O. (2004) GDAP: A Web Tool for Structural Disulfide Bond Prediction. Nucleic Acids Research, in press.

The GDAP server is currently not maintained and may not be available. For questions, comments, or bulk predictions please contact Brian O'Connor.