Computational Seminar
The seminar is devoted to informal computational biology discussions.
The speaker of each month will discuss his research progress/problems or could present a highly interesting computational paper instead.
Schedule
Day: The third Wednesday of every month at 2:00pm
Place: MBI 244 (2nd floor conference room)
| Date | Speaker | Presentation Title |
|---|---|---|
| Aug 20, 2008 |
Meytal Landau |
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| Jul 16, 2008 | Christopher Lee, Biochemistry & Molecular Biology UCLA
|
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| Jun 18, 2008 | Luki Goldschmidt | |
| May 21, 2008 | Ming Liu | |
| Apr 16, 2008 | Luis Arturo Medrano-Soto | What is the best working definition of orthology? |
| Mar 19, 2008 | Matteo Pellegrini, MCDB UCLA | Whole Genome DNA Methylation in Arabidopsis at Single Base Resolution with Solexa/Illumina Ultra-High-Throughput Sequencing |
| Feb 20, 2008 | Eleazar Eskin, CS & Human Genetics UCLA | Integrated Genomics Approaches to Discovering the Genetic Basis of Complex Traits in Inbred Mouse Strains |
| Jan 30, 2008 | Dr. Sorel T Fitz-Gibbon Astrobiology UCLA |
Metagenomic analysis of the sub-seafloor biosphere |
| Dec 12, 2007 | Arturo Medrano-Soto | Paper presentation:BMC Bioinformatics,Aug 8, 2007. 8:294. "Quantitative sequence-function relationships in proteins based on gene ontology." |
| Oct 17, 2007 | Richard Llewellyn | Applying Bayesian Functional Linkages to uncharacterized prokaryotes. |
| Sep 19, 2007 | Frank Pettit | Representing Complex Molecular Interactions in Databases |
| Aug 22, 2007 | Lukasz Salwinski | MiTap extension to Firefox: a tool for interactive building of protein interaction networks in Cytoscape. |
| Jul 18, 2007 | Debnath Pal, IISc Bangalore | Dissecting functionally important segments in proteins using Gene Ontology and geometric clustering of peptide fragments |
| Jun 20, 2007 | Lukasz Salwinski | Paper presentation: ENCODE Project Consortium. (2007) Nature, Jun 14;447(7146), 799-816. "Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project." |
| May 16, 2007 | Einat Sprinzak | Reconstructing Regulatory Relations between Cellular Complexes using Logic Analysis |
| Mar 28, 2007 | Chris Miller | Paper presentation: Science, 2007 Feb 23;315(5815), 1126-30. "Quantitative phylogenetic assessment of microbial communities in diverse environments." |
| Jan 31, 2007 | Lukasz Salwinski | 'The MiSink Plugin. Cytoscape as a graphical front-end to DIP.' |
| Jan 17, 2007 | Huiying Li | Paper presentation: Science, 2006, 314(5797), 268-74. "The Consensus Coding Sequences of Human Breast and Colorectal Cancers" |
| Dec 6, 2006 | Mike Smoot, UCSD | Mike will talk about Cytoscape internals, starting with an introduction to Cytoscape plugin development |
| Nov 22, 2006 | Lukasz Salwinski | Paper presentation: PLoS Biol., 2006 Sep 19;4(10), e153. "Stratus Not Altocumulus: A New View of the Yeast Protein Interaction Network" |
| Oct 18, 2006 | James Stroud | Intramolecular domain swapping" |
| Sep 6, 2006 | Jason Nerothin | curator wrap-up and bioinformatics data-access patterns |
| Aug 16, 2006 | Chris Miller | Chris will discuss computational methods to detect correlated mutations from multiple sequence alignments |
| Jul 27, 2006 | Lukasz Salwinski | Lukasz will discuss some research topics which are related to DIP (Database of Interacting Proteins) |
Contact us for problems and comments
Last modified: Friday, May 09, 2008
