C. elegans Mitochondrial Protein Prediction

Predictions were run on all ORFs from the C. elegans genome. Each file below represents the predictions at a given threshhold offset (see the Methods section of the paper for a full description.) The coverage and accuracy of the method on the known mitochondrial proteins are reported for each set. In the following table, the total numbers of proteins predicted to be mitochondrial are listed under the heading "Predicted", the total numbers currently known to be mitochondrial are listed under the heading "Known". Specific proteins in the tables are labeled as K (for Known) or P (for Predicted) accordingly.

Predictions for C. elegans
Accuracy	Coverage	Predicted	Known	File
36%	78%	698	69	Proteins
39%	74%	614	66	Proteins
40%	73%	553	65	Proteins
41%	73%	494	65	Proteins
41%	72%	468	64	Proteins
44%	70%	422	52	Proteins
46%	69%	375	61	Proteins
52%	63%	323	56	Proteins
52%	61%	304	54	Proteins
54%	61%	288	54	Proteins
54%	60%	269	53	Proteins
52%	49%	238	44	Proteins
53%	46%	213	41	Proteins
52%	42%	190	37	Proteins
56%	35%	170	31	Proteins
61%	34%	151	30	Proteins
65%	31%	138	28	Proteins
68%	30%	128	27	Proteins
59%	18%	115	16	Proteins
60%	13%	84	12	Proteins
63%	11%	59	10	Proteins
50%	7%	34	6	Proteins
50%	7%	43	6	Proteins
56%	6%	35	5	Proteins
40%	2%	30	2	Proteins
25%	1%	22	1	Proteins
50%	1%	17	1	Proteins
50%	1%	9	1	Proteins
0%	0%	4	0	Proteins
0%	0%	4	0	Proteins
0%	0%	1	0	Proteins

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