Transciption factor dependent genes in Mycobacterium tuberculosis
 

Genes and proteins in Mycobacterium tuberculosis that are dependent of an particular transcription factor, identified by comperative proteomics are displayed here.
Study NameStudy TitleReferenceMutation Type
r00024gene expression in response heat shock - DnaK regulon -mircroarray - Young and ButcherStewart GR, Wer...Click here
r00025gene expression in response heat shock - DnaK and GroE regulon -mircroarray - Young and ButcherStewart GR, Wer...Click here
t00001hypoxia induced dosR dependent genes - microarray - SchoolnikPark HD, Guinn ...Click here
t00002oxidative stress, sigH dependent (wt vs delta sigH) - microarray - Schoolnik and SmithManganelli R, V...Click here
t00003LexA/SOS response DNA damage dependent genes - microarry - DavisDavis EO, Dulla...Click here
t00004SDS, sigE dependent genes (wt vs delta sigE) - microarray - Schoolnik and SmithManganelli R, V...Click here
t00005oxidative stress, sigH dependent genes, downregulated OD600=0.3 in delta sigH - microarray - BishaiKaushal D, Schr...Click here
t00006oxidative stress, sigH dependent genes, downregulated OD600=0.6 in delta sigH - microarray - BishaiKaushal D, Schr...Click here
t00007oxidative stress, sigH dependent genes, downregulated OD600=1.2 in delta sigH - microarray - BishaiKaushal D, Schr...Click here
t00008upregulated OD600=0.3 in delta sigH - microarray - BishaiKaushal D, Schr...Click here
t00009oxidative stress, sigH dependent genes, upregulated OD600=0.6 in delta sigH - microarray - BishaiKaushal D, Schr...Click here
t00010oxidative stress, sigH dependent genes, upregulated OD600=1.2 in delta sigH - microarray - BishaiKaushal D, Schr...Click here
t00011IdeR- iron-dependent regulator regulated genes - microarray - Schoolnik and SmithRodriguez GM, V...Click here
t00012two component seX3 dependent genes - upregulated in delata seX3,regX3 strain - microarray - StokerParish T, Smith...Click here
t00013two component seX3 dependent genes - downregulated in delata seX3,regX3 strain - microarray - StokerParish T, Smith...Click here
t00014dosRS two-component system dependet genesParish T, Smith...Click here
t00015sigC dependet gene set - lethality in mice - microarray - BishaiSun R, Converse...Click here
t00016SigF dependent gene set - microarray - BishaiGeiman DE, Kaus...Click here
r00049100 heat shock proteins identified in the DnaK / GroE regulon study - mircroarray - Young and ButcherStewart GR, Wer...Click here

Access the regulated proteins/genes via the study name. In the dataset acccess the Mycobacterium tuberculosis Structural Genomics Database entry via the Rv-number and the computational linkages in the Prolinks Database via the gene name.

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