| ORF | name | Annotation |
| Rv0034 | Rv0034 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0046c | ino1 | MYO-INOSITOL-1-PHOSPHATE SYNTHASE INO1 (Inositol 1-phosphate synthetase) (D-glucose 6-phosphate cycloaldolase) (Glucose 6-phosphate cyclase) (Glucocycloaldolase) |
| Rv0047c | Rv0047c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0053 | rpsF | PROBABLE 30S RIBOSOMAL PROTEIN S6 RPSF |
| Rv0054 | ssb | PROBABLE SINGLE-STRAND BINDING PROTEIN SSB (HELIX-DESTABILIZING PROTEIN) |
| Rv0055 | rpsR1 | PROBABLE 30S RIBOSOMAL PROTEIN S18-1 RPSR1 |
| Rv0056 | rplI | PROBABLE 50S RIBOSOMAL PROTEIN L9 RPLI |
| Rv0068 | Rv0068 | PROBABLE OXIDOREDUCTASE |
| Rv0105c | rpmB1 | PROBABLE 50S RIBOSOMAL PROTEIN L28-1 RPMB1 |
| Rv0122 | Rv0122 | HYPOTHETICAL PROTEIN |
| Rv0123 | Rv0123 | HYPOTHETICAL PROTEIN |
| Rv0125 | pepA | PROBABLE SERINE PROTEASE PEPA (SERINE PROTEINASE) (MTB32A) |
| Rv0145 | Rv0145 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0146 | Rv0146 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0196 | Rv0196 | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
| Rv0197 | Rv0197 | POSSIBLE OXIDOREDUCTASE |
| Rv0203 | Rv0203 | POSSIBLE EXPORTED PROTEIN |
| Rv0211 | pckA | PROBABLE IRON-REGULATED PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP] PCKA (PHOSPHOENOLPYRUVATE CARBOXYLASE) (PEPCK)(PEP CARBOXYKINASE) |
| Rv0244c | fadE5 | PROBABLE ACYL-CoA DEHYDROGENASE FADE5 |
| Rv0245 | Rv0245 | POSSIBLE OXIDOREDUCTASE |
| Rv0251c | hsp | HEAT SHOCK PROTEIN HSP (HEAT-STRESS-INDUCED RIBOSOME-BINDING PROTEIN A) |
| Rv0282 | Rv0282 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0327c | cyp135A1 | POSSIBLE CYTOCHROME P450 135A1 CYP135A1 |
| Rv0350 | dnaK | PROBABLE CHAPERONE PROTEIN DNAK (HEAT SHOCK PROTEIN 70) (HEAT SHOCK 70 KDA PROTEIN) (HSP70) |
| Rv0351 | grpE | PROBABLE GRPE PROTEIN (HSP-70 COFACTOR) |
| Rv0352 | dnaJ1 | PROBABLE CHAPERONE PROTEIN DNAJ1 |
| Rv0353 | hspR | PROBABLE HEAT SHOCK PROTEIN TRANSCRIPTIONAL REPRESSOR HSPR (MERR FAMILY) |
| Rv0384c | clpB | PROBABLE ENDOPEPTIDASE ATP BINDING PROTEIN (CHAIN B) CLPB (CLPB PROTEIN) (HEAT SHOCK PROTEIN F84.1) |
| Rv0440 | groEL2 | 60 KDA CHAPERONIN 2 GROEL2 (PROTEIN CPN60-2) (GROEL PROTEIN 2) (65 KDA ANTIGEN) (HEAT SHOCK PROTEIN 65) (CELL WALL PROTEIN A) (ANTIGEN A) |
| Rv0466 | Rv0466 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0467 | icl | ISOCITRATE LYASE ICL (ISOCITRASE) (ISOCITRATASE) |
| Rv0468 | fadB2 | PROBABLE 3-HYDROXYBUTYRYL-CoA DEHYDROGENASE FADB2 (BETA-HYDROXYBUTYRYL-CoA DEHYDROGENASE) (BHBD) |
| Rv0469 | umaA | POSSIBLE MYCOLIC ACID SYNTHASE UMAA |
| Rv0474 | Rv0474 | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN |
| Rv0475 | hbhA | IRON-REGULATED HEPARIN BINDING HEMAGGLUTININ HBHA (ADHESIN) |
| Rv0476 | Rv0476 | POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN |
| Rv0477 | Rv0477 | POSSIBLE CONSERVED SECRETED PROTEIN |
| Rv0483 | lprQ | PROBABLE CONSERVED LIPOPROTEIN LPRQ |
| Rv0485 | Rv0485 | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
| Rv0493c | Rv0493c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0551c | fadD8 | PROBABLE FATTY-ACID-CoA LIGASE FADD8 (FATTY-ACID-CoA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) |
| Rv0563 | htpX | PROBABLE PROTEASE TRANSMEMBRANE PROTEIN HEAT SHOCK PROTEIN HTPX |
| Rv0567 | Rv0567 | PROBABLE METHYLTRANSFERASE/METHYLASE |
| Rv0585c | Rv0585c | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
| Rv0635 | Rv0635 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0654 | Rv0654 | PROBABLE DIOXYGENASE |
| Rv0663 | atsD | POSSIBLE ARYLSULFATASE ATSD (ARYL-SULFATE SULPHOHYDROLASE) (ARYLSULPHATASE) |
| Rv0683 | rpsG | PROBABLE 30S RIBOSOMAL PROTEIN S7 RPSG |
| Rv0684 | fusA1 | PROBABLE ELONGATION FACTOR G FUSA1 (EF-G) |
| Rv0700 | rpsJ | 30S RIBOSOMAL PROTEIN S10 RPSJ (TRANSCRIPTION ANTITERMINATION FACTOR NUSE) |
| Rv0701 | rplC | PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC |
| Rv0702 | rplD | PROBABLE 50S RIBOSOMAL PROTEIN L4 RPLD |
| Rv0703 | rplW | PROBABLE 50S RIBOSOMAL PROTEIN L23 RPLW |
| Rv0706 | rplV | PROBABLE 50S RIBOSOMAL PROTEIN L22 RPLV |
| Rv0711 | atsA | POSSIBLE ARYLSULFATASE ATSA (ARYL-SULFATE SULPHOHYDROLASE) (ARYLSULPHATASE) |
| Rv0714 | rplN | PROBABLE 50S RIBOSOMAL PROTEIN L14 RPLN |
| Rv0715 | rplX | PROBABLE 50S RIBOSOMAL PROTEIN L24 RPLX |
| Rv0716 | rplE | PROBABLE 50S RIBOSOMAL PROTEIN L5 RPLE |
| Rv0717 | rpsN1 | PROBABLE 30S RIBOSOMAL PROTEIN S14 RPSN1 |
| Rv0718 | rpsH | PROBABLE 30S RIBOSOMAL PROTEIN S8 RPSH |
| Rv0719 | rplF | PROBABLE 50S RIBOSOMAL PROTEIN L6 RPLF |
| Rv0721 | rpsE | PROBABLE 30S RIBOSOMAL PROTEIN S5 RPSE |
| Rv0722 | rpmD | PROBABLE 50S RIBOSOMAL PROTEIN L30 RPMD |
| Rv0723 | rplO | PROBABLE 50S RIBOSOMAL PROTEIN L15 RPLO |
| Rv0780 | purC | PHOSPHORIBOSYLAMINOIMIDAZOLE- SUCCINOCARBOXAMIDE SYNTHASE PURC (SAICAR SYNTHETASE) |
| Rv0813c | Rv0813c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0815c | cysA2 | PROBABLE THIOSULFATE SULFURTRANSFERASE CYSA2 (RHODANESE-LIKE PROTEIN) (THIOSULFATE CYANIDE TRANSSULFURASE) (THIOSULFATE THIOTRANSFERASE) |
| Rv0824c | desA1 | PROBABLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA1 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE) (PROTEIN DES) |
| Rv0830 | Rv0830 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0841 | Rv0841 | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
| Rv0846c | Rv0846c | PROBABLE OXIDASE |
| Rv0847 | lpqS | PROBABLE LIPOPROTEIN LPQS |
| Rv0859 | fadA | POSSIBLE ACYL-CoA THIOLASE FADA |
| Rv0860 | fadB | PROBABLE FATTY OXIDATION PROTEIN FADB |
| Rv0878c | PPE13 | PPE FAMILY PROTEIN |
| Rv0885 | Rv0885 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0921 | Rv0921 | POSSIBLE RESOLVASE |
| Rv0940c | Rv0940c | POSSIBLE OXIDOREDUCTASE |
| Rv0951 | sucC | PROBABLE SUCCINYL-CoA SYNTHETASE (BETA CHAIN) SUCC (SCS-BETA) |
| Rv0952 | sucD | PROBABLE SUCCINYL-CoA SYNTHETASE (ALPHA CHAIN) SUCD (SCS-ALPHA) |
| Rv0973c | accA2 | PROBABLE ACETYL-/PROPIONYL-COENZYME A CARBOXYLASE ALPHA CHAIN (ALPHA SUBUNIT) ACCA2: BIOTIN CARBOXYLASE + BIOTIN CARBOXYL CARRIER PROTEIN (BCCP) |
| Rv1015c | rplY | PROBABLE 50S RIBOSOMAL PROTEIN L25 RPLY |
| Rv1057 | Rv1057 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1168c | PPE17 | PPE FAMILY PROTEIN |
| Rv1169c | PE11 | PE FAMILY PROTEIN |
| Rv1177 | fdxC | PROBABLE FERREDOXIN FDXC |
| Rv1194c | Rv1194c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1195 | PE13 | PE FAMILY PROTEIN |
| Rv1221 | sigE | ALTERNATIVE RNA POLYMERASE SIGMA FACTOR SIGE |
| Rv1265 | Rv1265 | HYPOTHETICAL PROTEIN |
| Rv1285 | cysD | PROBABLE SULFATE ADENYLYLTRANSFERASE SUBUNIT 2 CYSD |
| Rv1343c | lprD | PROBABLE CONSERVED LIPOPROTEIN LPRD |
| Rv1344 | Rv1344 | PROBABLE ACYL CARRIER PROTEIN (ACP) |
| Rv1345 | fadD33 | POSSIBLE POLYKETIDE SYNTHASE FADD33 |
| Rv1347c | Rv1347c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1348 | Rv1348 | PROBABLE DRUGS-TRANSPORT TRANSMEMBRANE ATP-BINDING PROTEIN ABC TRANSPORTER |
| Rv1349 | Rv1349 | PROBABLE DRUGS-TRANSPORT TRANSMEMBRANE ATP-BINDING PROTEIN ABC TRANSPORTER |
| Rv1379 | pyrR | PROBABLE PYRIMIDINE OPERON REGULATORY PROTEIN PYRR |
| Rv1461 | Rv1461 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1462 | Rv1462 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1463 | Rv1463 | PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER |
| Rv1464 | csd | PROBABLE CYSTEINE DESULFURASE CSD |
| Rv1465 | Rv1465 | POSSIBLE NITROGEN FIXATION RELATED PROTEIN |
| Rv1475c | acn | PROBABLE IRON-REGULATED ACONITATE HYDRATASE ACN (Citrate hydro-lyase) (Aconitase) |
| Rv1519 | Rv1519 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1534 | Rv1534 | Probable transcriptional regulator |
| Rv1535 | Rv1535 | HYPOTHETICAL PROTEIN |
| Rv1536 | ileS | isoleucyl-tRNA synthetase ileS |
| Rv1553 | frdB | PROBABLE FUMARATE REDUCTASE [IRON-SULFUR SUBUNIT] FRDB (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) |
| Rv1592c | Rv1592c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1636 | TB15.3 | IRON-REGULATED CONSERVED HYPOTHETICAL PROTEIN TB15.3 |
| Rv1779c | Rv1779c | HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN |
| Rv1787 | PPE25 | PPE FAMILY PROTEIN |
| Rv1806 | PE20 | PE FAMILY PROTEIN |
| Rv1807 | PPE31 | PPE FAMILY PROTEIN |
| Rv1808 | PPE32 | PPE FAMILY PROTEIN |
| Rv1809 | PPE33 | PPE FAMILY PROTEIN |
| Rv1811 | mgtC | POSSIBLE Mg2+ TRANSPORT P-TYPE ATPASE C MGTC |
| Rv1854c | ndh | PROBABLE NADH DEHYDROGENASE NDH |
| Rv1856c | Rv1856c | POSSIBLE OXIDOREDUCTASE |
| Rv1875 | Rv1875 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1894c | Rv1894c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2025c | Rv2025c | POSSIBLE CONSERVED MEMBRANE PROTEIN |
| Rv2121c | hisG | Probable ATP phosphoribosyltransferase HisG |
| Rv2123 | PPE37 | PPE FAMILY PROTEIN |
| Rv2327 | Rv2327 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2377c | mbtH | PUTATIVE CONSERVED PROTEIN MBTH |
| Rv2380c | mbtE | PEPTIDE SYNTHETASE MBTE (PEPTIDE SYNTHASE) |
| Rv2381c | mbtD | POLYKETIDE SYNTHETASE MBTD (POLYKETIDE SYNTHASE) |
| Rv2383c | mbtB | PHENYLOXAZOLINE SYNTHASE MBTB (PHENYLOXAZOLINE SYNTHETASE) |
| Rv2386c | mbtI | PUTATIVE ISOCHORISMATE SYNTHASE MBTI |
| Rv2441c | rpmA | PROBABLE 50S RIBOSOMAL PROTEIN L27 RPMA |
| Rv2442c | rplU | PROBABLE 50S RIBOSOMAL PROTEIN L21 RPLU |
| Rv2450c | rpfE | PROBABLE RESUSCITATION-PROMOTING FACTOR RPFE |
| Rv2699c | Rv2699c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2707 | Rv2707 | PROBABLE CONSERVED TRANSMEMBRANE ALANINE AND LEUCINE RICH PROTEIN |
| Rv2710 | sigB | RNA POLYMERASE SIGMA FACTOR SIGB |
| Rv2724c | fadE20 | PROBABLE ACYL-CoA DEHYDROGENASE FADE20 |
| Rv2838c | rbfA | PROBABLE RIBOSOME-BINDING FACTOR A RBFA (P15B PROTEIN) |
| Rv2839c | infB | PROBABLE TRANSLATION INITIATION FACTOR IF-2 INFB |
| Rv2909c | rpsP | PROBABLE 30S RIBOSOMAL PROTEIN S16 RPSP |
| Rv2930 | fadD26 | FATTY-ACID-CoA LIGASE FADD26 (FATTY-ACID-COA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) |
| Rv2931 | ppsA | PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSA |
| Rv2932 | ppsB | PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSB |
| Rv2933 | ppsC | PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSC |
| Rv2935 | ppsE | PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSE |
| Rv2940c | mas | PROBABLE MULTIFUNCTIONAL MYCOCEROSIC ACID SYNTHASE MEMBRANE-ASSOCIATED MAS |
| Rv2959c | Rv2959c | POSSIBLE METHYLTRANSFERASE (METHYLASE) |
| Rv3001c | ilvC | PROBABLE KETOL-ACID REDUCTOISOMERASE ILVC (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) |
| Rv3002c | ilvN | PROBABLE ACETOLACTATE SYNTHASE (SMALL SUBUNIT) ILVN (ACETOHYDROXY-ACID SYNTHASE) (AHAS) (ALS) |
| Rv3003c | ilvB1 | PROBABLE ACETOLACTATE SYNTHASE (LARGE SUBUNIT) ILVB1 (ACETOHYDROXY-ACID SYNTHASE) |
| Rv3061c | fadE22 | PROBABLE ACYL-CoA DEHYDROGENASE FADE22 |
| Rv3117 | cysA3 | PROBABLE THIOSULFATE SULFURTRANSFERASE CYSA3 (RHODANESE-LIKE PROTEIN) (THIOSULFATE CYANIDE TRANSSULFURASE) (THIOSULFATE THIOTRANSFERASE) |
| Rv3135 | PPE50 | PPE FAMILY PROTEIN |
| Rv3173c | Rv3173c | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY TETR/ACRR-FAMILY) |
| Rv3183 | Rv3183 | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
| Rv3219 | whiB1 | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB1 |
| Rv3229c | Rv3229c | POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) |
| Rv3230c | Rv3230c | HYPOTHETICAL OXIDOREDUCTASE |
| Rv3251c | rubA | PROBABLE RUBREDOXIN RUBA |
| Rv3252c | alkB | PROBABLE TRANSMEMBRANE ALKANE 1-MONOOXYGENASE ALKB (ALKANE 1-HYDROXYLASE) (LAURIC ACID OMEGA-HYDROXYLASE) (OMEGA-HYDROXYLASE) (FATTY ACID OMEGA-HYDROXYLASE) (ALKANE HYDROXYLASE-RUBREDOXIN) |
| Rv3269 | Rv3269 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3270 | ctpC | PROBABLE METAL CATION-TRANSPORTING P-TYPE ATPASE C CTPC |
| Rv3340 | metC | PROBABLE O-ACETYLHOMOSERINE SULFHYDRYLASE METC (HOMOCYSTEINE SYNTHASE) (O-ACETYLHOMOSERINE (THIOL)-LYASE) (OAH SULFHYDRYLASE) (O-ACETYL-L-HOMOSERINE SULFHYDRYLASE) |
| Rv3405c | Rv3405c | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
| Rv3406 | Rv3406 | PROBABLE DIOXYGENASE |
| Rv3407 | Rv3407 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3417c | groEL1 | 60 KDA CHAPERONIN 1 GROEL1 (PROTEIN CPN60-1) (GROEL PROTEIN 1) |
| Rv3418c | groES | 10 KDA CHAPERONIN GROES (PROTEIN CPN10) (PROTEIN GROES) (BCG-A HEAT SHOCK PROTEIN) (10 KDA ANTIGEN) |
| Rv3443c | rplM | PROBABLE 50S RIBOSOMAL PROTEIN L13 RPLM |
| Rv3459c | rpsK | PROBABLE 30S RIBOSOMAL PROTEIN S11 RPSK |
| Rv3460c | rpsM | PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM |
| Rv3461c | rpmJ | PROBABLE 50S RIBOSOMAL PROTEIN L36 RPMJ |
| Rv3462c | infA | PROBABLE TRANSLATION INITIATION FACTOR IF-1 INFA |
| Rv3484 | cpsA | POSSIBLE CONSERVED PROTEIN CPSA |
| Rv3503c | fdxD | PROBABLE FERREDOXIN FDXD |
| Rv3515c | fadD19 | PROBABLE FATTY-ACID-CoA LIGASE FADD19 (FATTY-ACID-CoA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) |
| Rv3516 | echA19 | POSSIBLE ENOYL-CoA HYDRATASE ECHA19 (ENOYL HYDRASE) (UNSATURATED ACYL-CoA HYDRATASE) (CROTONASE) |
| Rv3524 | Rv3524 | PROBABLE CONSERVED MEMBRANE PROTEIN |
| Rv3534c | Rv3534c | PROBABLE 4-HYDROXY-2-OXOVALERATE ALDOLASE (HOA) |
| Rv3535c | Rv3535c | PROBABLE ACETALDEHYDE DEHYDROGENASE (ACETALDEHYDE DEHYDROGENASE [ACETYLATING]) |
| Rv3537 | Rv3537 | PROBABLE DEHYDROGENASE |
| Rv3545c | cyp125 | PROBABLE CYTOCHROME P450 125 CYP125 |
| Rv3546 | fadA5 | PROBABLE ACETYL-CoA ACETYLTRANSFERASE FADA5 (ACETOACETYL-CoA THIOLASE) |
| Rv3569c | bphD | 2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOATE HYDROLASE BPHD |
| Rv3574 | Rv3574 | TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY TETR-FAMILY) |
| Rv3601c | panD | PROBABLE ASPARTATE 1-DECARBOXYLASE PRECURSOR PAND (ASPARTATE ALPHA-DECARBOXYLASE) |
| Rv3603c | Rv3603c | CONSERVED HYPOTHETICAL ALANINE AND LEUCINE RICH PROTEIN |
| Rv3804c | fbpA | SECRETED ANTIGEN 85-A FBPA (MYCOLYL TRANSFERASE 85A) (FIBRONECTIN-BINDING PROTEIN A) (ANTIGEN 85 COMPLEX A) |
| Rv3862c | whiB6 | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB6 |
| Rv3924c | rpmH | 50S RIBOSOMAL PROTEIN L34 RPMH |