| ORF | name | Annotation |
| Rv0002 | dnaN | DNA POLYMERASE III (BETA CHAIN) DNAN (DNA NUCLEOTIDYLTRANSFERASE) |
| Rv0040c | mtc28 | SECRETED PROLINE RICH PROTEIN MTC28 (PROLINE RICH 28 KDA ANTIGEN) |
| Rv0046c | ino1 | MYO-INOSITOL-1-PHOSPHATE SYNTHASE INO1 (Inositol 1-phosphate synthetase) (D-glucose 6-phosphate cycloaldolase) (Glucose 6-phosphate cyclase) (Glucocycloaldolase) |
| Rv0049 | Rv0049 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0112 | gca | POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA (GDP-D-MANNOSE DEHYDRATASE) |
| Rv0113 | gmhA | PROBABLE SEDOHEPTULOSE-7-PHOSPHATE ISOMERASE GMHA (PHOSPHOHEPTOSE ISOMERASE) |
| Rv0116c | Rv0116c | POSSIBLE CONSERVED MEMBRANE PROTEIN |
| Rv0120c | fusA2 | PROBABLE ELONGATION FACTOR G FUSA2 (EF-G) |
| Rv0128 | Rv0128 | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
| Rv0129c | fbpC | SECRETED ANTIGEN 85-C FBPC (85C) (ANTIGEN 85 COMPLEX C) (AG58C) (MYCOLYL TRANSFERASE 85C) (FIBRONECTIN-BINDING PROTEIN C) |
| Rv0165c | Rv0165c | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY GNTR-FAMILY) |
| Rv0188 | Rv0188 | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
| Rv0220 | lipC | PROBABLE ESTERASE LIPC |
| Rv0250c | Rv0250c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0251c | hsp | HEAT SHOCK PROTEIN HSP (HEAT-STRESS-INDUCED RIBOSOME-BINDING PROTEIN A) |
| Rv0262c | aac | AMINOGLYCOSIDE 2'-N-ACETYLTRANSFERASE AAC (AAC(2')-IC) |
| Rv0268c | Rv0268c | HYPOTHETICAL PROTEIN |
| Rv0274 | Rv0274 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0309 | Rv0309 | POSSIBLE CONSERVED EXPORTED PROTEIN |
| Rv0360c | Rv0360c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0390 | Rv0390 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0455c | Rv0455c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0461 | Rv0461 | PROBABLE TRANSMEMBRANE PROTEIN |
| Rv0516c | Rv0516c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0517 | Rv0517 | POSSIBLE MEMBRANE ACYLTRANSFERASE |
| Rv0580c | Rv0580c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0645c | mmaA1 | METHOXY MYCOLIC ACID SYNTHASE 1 MMAA1 (METHYL MYCOLIC ACID SYNTHASE 1) (MMA1) (HYDROXY MYCOLIC ACID SYNTHASE) |
| Rv0760c | Rv0760c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0761c | adhB | POSSIBLE ZINC-CONTAINING ALCOHOL DEHYDROGENASE NAD DEPENDENT ADHB |
| Rv0814c | sseC2 | CONSERVED HYPOTHETICAL PROTEIN SSEC2 |
| Rv0853c | pdc | PROBABLE PYRUVATE OR INDOLE-3-PYRUVATE DECARBOXYLASE PDC |
| Rv0854 | Rv0854 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv0882 | Rv0882 | PROBABLE TRANSMEMBRANE PROTEIN |
| Rv1014c | pth | PROBABLE PEPTIDYL-TRNA HYDROLASE PTH |
| Rv1017c | prsA | PROBABLE RIBOSE-PHOSPHATE PYROPHOSPHOKINASE PRSA (Phosphoribosyl pyrophosphate synthetase) (PRPP synthetase) |
| Rv1060 | Rv1060 | HYPOTHETICAL PROTEIN |
| Rv1076 | lipU | POSSIBLE LIPASE LIPU |
| Rv1078 | pra | Probable Proline-rich antigen homolog pra |
| Rv1144 | Rv1144 | PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE |
| Rv1158c | Rv1158c | CONSERVED HYPOTHETICAL ALA-, PRO-RICH PROTEIN |
| Rv1160 | mutT2 | PROBABLE MUTATOR PROTEIN MUTT (7,8-dihydro-8-oxoguanine-triphosphatase) (8-OXO-DGTPASE) |
| Rv1181 | pks4 | PROBABLE POLYKETIDE BETA-KETOACYL SYNTHASE PKS4 |
| Rv1182 | papA3 | PROBABLE CONSERVED POLYKETIDE SYNTHASE ASSOCIATED PROTEIN PAPA3 |
| Rv1187 | rocA | PROBABLE PYRROLINE-5-CARBOXYLATE DEHYDROGENASE ROCA |
| Rv1250 | Rv1250 | PROBABLE DRUG-TRANSPORT INTEGRAL MEMBRANE PROTEIN |
| Rv1270c | lprA | POSSIBLE LIPOPROTEIN LPRA |
| Rv1284 | Rv1284 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1352 | Rv1352 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1368 | lprF | PROBABLE CONSERVED LIPOPROTEIN LPRF |
| Rv1375 | Rv1375 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1388 | mihF | PUTATIVE INTEGRATION HOST FACTOR MIHF |
| Rv1394c | cyp132 | PROBABLE CYTOCHROME P450 132 CYP132 |
| Rv1472 | echA12 | POSSIBLE ENOYL-CoA HYDRATASE ECHA12 (ENOYL HYDRASE) (UNSATURATED ACYL-CoA HYDRATASE) (CROTONASE) |
| Rv1476 | Rv1476 | POSSIBLE MEMBRANE PROTEIN |
| Rv1500 | Rv1500 | PROBABLE GLYCOSYLTRANSFERASE |
| Rv1522c | mmpL12 | PROBABLE CONSERVED TRANSMEMBRANE TRANSPORT PROTEIN MMPL12 |
| Rv1552 | frdA | PROBABLE FUMARATE REDUCTASE [FLAVOPROTEIN SUBUNIT] FRDA (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) |
| Rv1637c | Rv1637c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1685c | Rv1685c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1686c | Rv1686c | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER |
| Rv1687c | Rv1687c | PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER |
| Rv1690 | lprJ | PROBABLE LIPOPROTEIN LPRJ |
| Rv1754c | Rv1754c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1808 | PPE32 | PPE FAMILY PROTEIN |
| Rv1809 | PPE33 | PPE FAMILY PROTEIN |
| Rv1886c | fbpB | SECRETED ANTIGEN 85-B FBPB (85B) (ANTIGEN 85 COMPLEX B) (MYCOLYL TRANSFERASE 85B) (FIBRONECTIN-BINDING PROTEIN B) (EXTRACELLULAR ALPHA-ANTIGEN) |
| Rv1904 | Rv1904 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv1915 | aceAa | PROBABLE ISOCITRATE LYASE aceAa [FIRST PART] (ISOCITRASE) (ISOCITRATASE) (ICL) |
| Rv1987 | Rv1987 | POSSIBLE CHITINASE |
| Rv1995 | Rv1995 | HYPOTHETICAL PROTEIN |
| Rv2025c | Rv2025c | POSSIBLE CONSERVED MEMBRANE PROTEIN |
| Rv2036 | Rv2036 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2046 | lppI | Probable lipoprotein lppI |
| Rv2050 | Rv2050 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2137c | Rv2137c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2160c | Rv2160c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2169c | Rv2169c | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
| Rv2185c | TB16.3 | CONSERVED HYPOTHETICAL PROTEIN TB16.3 |
| Rv2186c | Rv2186c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2212 | Rv2212 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2224c | Rv2224c | Probable exported protease |
| Rv2245 | kasA | 3-OXOACYL-[ACYL-CARRIER PROTEIN] SYNTHASE 1 KASA (BETA-KETOACYL-ACP SYNTHASE) (KAS I) |
| Rv2268c | cyp128 | PROBABLE CYTOCHROME P450 128 CYP128 |
| Rv2271 | Rv2271 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2288 | Rv2288 | HYPOTHETICAL PROTEIN |
| Rv2289 | cdh | Probable CDP-diacylglycerol pyrophosphatase Cdh (CDP-diacylglycerol diphosphatase) (CDP-diacylglycerol phosphatidylhydrolase) |
| Rv2301 | cut2 | PROBABLE CUTINASE CUT2 |
| Rv2302 | Rv2302 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2309c | Rv2309c | POSSIBLE INTEGRASE (FRAGMENT) |
| Rv2329c | narK1 | PROBABLE NITRITE EXTRUSION PROTEIN 1 NARK1 (NITRITE FACILITATOR 1) |
| Rv2338c | moeW | POSSIBLE MOLYBDOPTERIN BIOSYNTHESIS PROTEIN MOEW |
| Rv2348c | Rv2348c | HYPOTHETICAL PROTEIN |
| Rv2358 | Rv2358 | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ARSR-FAMILY) |
| Rv2369c | Rv2369c | HYPOTHETICAL PROTEIN |
| Rv2406c | Rv2406c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2409c | Rv2409c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2412 | rpsT | PROBABLE 30S RIBOSOMAL PROTEIN S20 RPST |
| Rv2413c | Rv2413c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2442c | rplU | PROBABLE 50S RIBOSOMAL PROTEIN L21 RPLU |
| Rv2511 | orn | OLIGORIBONUCLEASE ORN |
| Rv2517c | Rv2517c | HYPOTHETICAL PROTEIN |
| Rv2557 | Rv2557 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2558 | Rv2558 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2562 | Rv2562 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2632c | Rv2632c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2633c | Rv2633c | HYPOTHETICAL PROTEIN |
| Rv2658c | Rv2658c | POSSIBLE PROPHAGE PROTEIN |
| Rv2659c | Rv2659c | PROBABLE phiRv2 PROPHAGE INTEGRASE |
| Rv2661c | Rv2661c | HYPOTHETICAL PROTEIN |
| Rv2663 | Rv2663 | HYPOTHETICAL PROTEIN |
| Rv2674 | Rv2674 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2683 | Rv2683 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2700 | Rv2700 | POSSIBLE CONSERVED SECRETED ALANINE RICH PROTEIN |
| Rv2708c | Rv2708c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv2780 | ald | SECRETED L-ALANINE DEHYDROGENASE ALD (40 KDA ANTIGEN) (TB43) |
| Rv2873 | mpt83 | CELL SURFACE LIPOPROTEIN MPT83 (LIPOPROTEIN P23) |
| Rv2875 | mpt70 | MAJOR SECRETED IMMUNOGENIC PROTEIN MPT70 |
| Rv2916c | ffh | PROBABLE SIGNAL RECOGNITION PARTICLE PROTEIN FFH (FIFTY-FOUR HOMOLOG) (SRP PROTEIN) |
| Rv3058c | Rv3058c | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY TETR-FAMILY) |
| Rv3059 | cyp136 | PROBABLE CYTOCHROME P450 136 CYP136 |
| Rv3087 | Rv3087 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3088 | Rv3088 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3089 | fadD13 | PROBABLE CHAIN -FATTY-ACID-CoA LIGASE FADD13 (FATTY-ACYL-CoA SYNTHETASE) |
| Rv3096 | Rv3096 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3117 | cysA3 | PROBABLE THIOSULFATE SULFURTRANSFERASE CYSA3 (RHODANESE-LIKE PROTEIN) (THIOSULFATE CYANIDE TRANSSULFURASE) (THIOSULFATE THIOTRANSFERASE) |
| Rv3118 | sseC1 | CONSERVED HYPOTHETICAL PROTEIN SSEC1 |
| Rv3142c | Rv3142c | HYPOTHETICAL PROTEIN |
| Rv3171c | hpx | POSSIBLE NON-HEME HALOPEROXIDASE HPX |
| Rv3241c | Rv3241c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3259 | Rv3259 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3260c | whiB2 | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB2 |
| Rv3287c | rsbW | ANTI-SIGMA FACTOR RSBW (SIGMA NEGATIVE EFFECTOR) |
| Rv3289c | Rv3289c | POSSIBLE TRANSMEMBRANE PROTEIN |
| Rv3290c | lat | PROBABLE L-LYSINE-EPSILON AMINOTRANSFERASE LAT (L-LYSINE AMINOTRANSFERASE) (LYSINE 6-AMINOTRANSFERASE) |
| Rv3291c | Rv3291c | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) |
| Rv3292 | Rv3292 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3310 | Rv3310 | POSSIBLE ACID PHOSPHATASE (ACID PHOSPHOMONOESTERASE) (PHOSPHOMONOESTERASE) (GLYCEROPHOSPHATASE) |
| Rv3390 | lpqD | PROBABLE CONSERVED LIPOPROTEIN LPQD |
| Rv3477 | PE31 | PE FAMILY PROTEIN |
| Rv3499c | mce4A | MCE-FAMILY PROTEIN MCE4A |
| Rv3500c | yrbE4B | CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B |
| Rv3528c | Rv3528c | HYPOTHETICAL PROTEIN |
| Rv3572 | Rv3572 | HYPOTHETICAL PROTEIN |
| Rv3584 | lpqE | POSSIBLE CONSERVED LIPOPROTEIN LPQE |
| Rv3588c | Rv3588c | CARBONIC ANHYDRASE (CARBONATE DEHYDRATASE) (CARBONIC DEHYDRATASE) |
| Rv3612c | Rv3612c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3613c | Rv3613c | HYPOTHETICAL PROTEIN |
| Rv3614c | Rv3614c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3616c | Rv3616c | CONSERVED HYPOTHETICAL ALANINE AND GLYCINE RICH PROTEIN |
| Rv3617 | ephA | PROBABLE EPOXIDE HYDROLASE EPHA (EPOXIDE HYDRATASE) (ARENE-OXIDE HYDRATASE) |
| Rv3628 | ppa | INORGANIC PYROPHOSPHATASE PPA (PYROPHOSPHATE PHOSPHO-HYDROLASE) (PPASE) (INORGANIC DIPHOSPHATASE) (DIPHOSPHATE PHOSPHO-HYDROLASE) |
| Rv3633 | Rv3633 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3634c | galE1 | UDP-GLUCOSE 4-EPIMERASE GALE1 (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHO-GALACTOSE 4-EPIMERASE) |
| Rv3666c | dppA | PROBABLE PERIPLASMIC DIPEPTIDE-BINDING LIPOPROTEIN DPPA |
| Rv3675 | Rv3675 | POSSIBLE MEMBRANE PROTEIN |
| Rv3676 | Rv3676 | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY CRP/FNR-FAMILY) |
| Rv3699 | Rv3699 | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3706c | Rv3706c | CONSERVED HYPOTHETICAL PROLINE RICH PROTEIN |
| Rv3734c | Rv3734c | CONSERVED HYPOTHETICAL PROTEIN |
| Rv3750c | Rv3750c | POSSIBLE EXCISIONASE |
| Rv3760 | Rv3760 | POSSIBLE CONSERVED MEMBRANE PROTEIN |
| Rv3763 | lpqH | 19 KDA LIPOPROTEIN ANTIGEN PRECURSOR LPQH |
| Rv3810 | pirG | EXPORTED REPETITIVE PROTEIN PRECURSOR PIRG (CELL SURFACE PROTEIN) (EXP53) |
| Rv3824c | papA1 | PROBABLE CONSERVED POLYKETIDE SYNTHASE ASSOCIATED PROTEIN PAPA1 |
| Rv3846 | sodA | SUPEROXIDE DISMUTASE [FE] SODA |
| Rv3852 | hns | POSSIBLE HISTONE-LIKE PROTEIN HNS |
| Rv3889c | Rv3889c | HYPOTHETICAL PROTEIN |
| Rv3890c | esxC | ESAT-6 LIKE PROTEIN ESXC (ESAT-6 like protein 11) |
| Rv3891c | esxD | POSSIBLE ESAT-6 LIKE PROTEIN ESXD |
| Rv3914 | trxC | THIOREDOXIN TRXC (TRX) (MPT46) |