C125: Chemistry Fall 2002

Browsing the Protein Data Bank and Viewing 3-D structures

A) Instructional movies

Movies showing diffraction data and how resolution, phases and amplitudes affect the electron density maps.

B) Tutorials using RASMOL

Transcription factor Gal4 complex

DNA quadruplex (Optional Homework)

C) Tutorials using PYMOL

Using PYMOL to view Electron Density Maps

D) Tutorials using Swiss PDB Viewer (DEEPVIEW)

Using DEEPVIEW to mutate residues

E) Tutorials using WebLabViewer